Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2454 ATGGCTGCTTCAGAGGAGAATAGTGCATTGTTCCCGATATTCATATTGACAATAATGGCAATTCCTATAGTGCCATATACAATAACGAAGTTGTGTCGTGCTGCCACTAAAAAGTCAAAGAGCTTGCACTGTCAGTGCTCTGAATGCTCGCGATCAGGGAAGTATCGTAAATCGATATTCAAGAGGATTTCAAATGTCTCAACATGCAGTAACTTGACATTATTGCTGCTTTGGGTGGTTATGATTATTCTGGTTTATTACATAAAGACTATGAGTCGTGAGATTGAAGTTTTCGATCCATTTAGTATCCTTGGATTAGAGCCTGGAGCGCCAGAGTCAGAAGTAAAGAAAAAATATAGGAGACTTTCTATTCAATTCCATCCAGATAAAAATCCAGATCCAGAGGCACACAAGTATTTTGTTGAGTACATTGCCAAGGCTTATCAAGCTCTGACAGATCCAATAGCTCGTGAAAATTATGAAAAATATGGCCATCCTGATGGCAGGCAGGGATTTCAAATGGGTATAGCTCTCCCCCAATTCCTGCTAAATATTGATGGGGCATCTGGTGGAATACTTCTTCTTTGGATTGTTGGTGTGTGTATTCTCTTGCCATTGGTAGTTGCTGTTGTTTATCTCTCCAGATCATCAAAGTATACTGGCAACTATGTGATGCATCAAACACTTTCCACTTACTATTACCTCATGAAGCCTTCTTTGGCCCCCAGCAAAGTCATGGATGTCTTCATAAAGGCTGCTGAATATATGGAAATTCCAGTTCGTAGAACTGATGATGAACCCCTTCAGAAGCTTTTTATGTTGGTAAGGAGTGAGTTGAATCTTGACCTCAAGAACATTAAGCAAGAGCAGGCAAAGTTTTGGAAGCAGCATCCTGCACTGGTTAAGACAGAGCTGTTAGTTCAAGCACAATTGACCCGTGAATTTGCAGCATTGTCTCCATCTTTACAAAGTGATTTCAGACGAATTTTAGAAACAGCTCCTCGCCTTCTCGAAGAATTAATGAAGATGGCAGTTATACCACGCAATGCTCAGGGGCATGGGTGGCTGAGGCCTGCAATTGGTGTTGTTGAGCTTTCTCAATGCATCATCCAGGCTGTTCCTCTCAGTGCTAGAAAGACTACTGGTGGATCTCCTGAAGGCATTGCACCATTTTTGCAGTTGCCGCATATTAGTGAGACTGTTATTAAGAAGGTGGCTCGCAAGAAGGTGAGAACGTTTCAGGAACTTCATGACATGGACTCTCAGGAGCGAGCTGACCTGCTTACTCAAACAGCTGGGTTATCTTCTACTGAAGTACAAGACATTGAGACGGTACTGGATATGATGCCTTCCTTGACACTTGAGGTAACTTGCGAGACTGAAGGGGAAGAGGGTATACAAGAGGGTGATATTGTTACTATCCACGCTTGGATAAATATTAAAAGGGGTAATGGTTTGATCGGTGCCCTTCCTCATGCCCCATACTACCCATTTCACAAGGAAGAAAATTTCTGGTTCTTGCTTGCGGATTCTGTTTCCAATAATGTGTGGTTTTCTCAGAAGGTTAGTTTCATGGATGAAGCTGCTGCTGTAACTGCTGCATCTAAGGCAATTGAGGAATCTATGGAGGGGTCAGGAGCAAATGTGAAGGAGACCAGTAGGGCAGTTGCAGAAGCAGTGGAGAAGGTGAGGGGGGGCTCTAGATTGGTAATGGGCAAGTTCCAGGCCCCATCAGAGGGCAGCTACAGTTTGACTTGCTATTGTTTGTGTGACTCTTGGTTGGGCTGTGACAGAAGGACAAACTTAAAGCTCAAAATTTTAAAACGGACTCGGGCTGGCACCAGGGGTGCTGCTTTAGCTGATGAAGGACCTGTCATGGAGGATGGAGTTGAGGAGGACGAGGACAATGAGGATGGAGAGTATGATGATGACTATGAGAGTGAATACAGCGAAGATGAAGATGATCAAAACACAAAAAATAAGCATCAAGCTGCCAATGGCACCGTGAATAAACATGGTCAAGCTGCAGAAAGTTCAGGCTCTGATGAAGAATGA 2055 0.4345 MAASEENSALFPIFILTIMAIPIVPYTITKLCRAATKKSKSLHCQCSECSRSGKYRKSIFKRISNVSTCSNLTLLLLWVVMIILVYYIKTMSREIEVFDPFSILGLEPGAPESEVKKKYRRLSIQFHPDKNPDPEAHKYFVEYIAKAYQALTDPIARENYEKYGHPDGRQGFQMGIALPQFLLNIDGASGGILLLWIVGVCILLPLVVAVVYLSRSSKYTGNYVMHQTLSTYYYLMKPSLAPSKVMDVFIKAAEYMEIPVRRTDDEPLQKLFMLVRSELNLDLKNIKQEQAKFWKQHPALVKTELLVQAQLTREFAALSPSLQSDFRRILETAPRLLEELMKMAVIPRNAQGHGWLRPAIGVVELSQCIIQAVPLSARKTTGGSPEGIAPFLQLPHISETVIKKVARKKVRTFQELHDMDSQERADLLTQTAGLSSTEVQDIETVLDMMPSLTLEVTCETEGEEGIQEGDIVTIHAWINIKRGNGLIGALPHAPYYPFHKEENFWFLLADSVSNNVWFSQKVSFMDEAAAVTAASKAIEESMEGSGANVKETSRAVAEAVEKVRGGSRLVMGKFQAPSEGSYSLTCYCLCDSWLGCDRRTNLKLKILKRTRAGTRGAALADEGPVMEDGVEEDEDNEDGEYDDDYESEYSEDEDDQNTKNKHQAANGTVNKHGQAAESSGSDEE* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2454 684 PRINTS DnaJ domain signature 101 119 IPR001623 -
Apr1g2454 684 PRINTS DnaJ domain signature 119 134 IPR001623 -
Apr1g2454 684 PRINTS DnaJ domain signature 136 156 IPR001623 -
Apr1g2454 684 PRINTS DnaJ domain signature 156 175 IPR001623 -
Apr1g2454 684 MobiDBLite consensus disorder prediction 661 676 - -
Apr1g2454 684 Gene3D DnaJ domain 98 182 IPR036869 -
Apr1g2454 684 SUPERFAMILY E set domains 454 608 IPR014756 -
Apr1g2454 684 SMART dnaj_3 98 156 IPR001623 -
Apr1g2454 684 PANTHER DNAJ PROTEIN ERDJ2-LIKE 1 677 - -
Apr1g2454 684 SUPERFAMILY Chaperone J-domain 95 192 IPR036869 -
Apr1g2454 684 Gene3D C2 domain 453 613 IPR035892 -
Apr1g2454 684 Gene3D - 389 448 - -
Apr1g2454 684 MobiDBLite consensus disorder prediction 618 684 - -
Apr1g2454 684 Pfam DnaJ domain 99 161 IPR001623 -
Apr1g2454 684 MobiDBLite consensus disorder prediction 625 653 - -
Apr1g2454 684 Pfam Sec63 Brl domain 222 602 IPR004179 -
Apr1g2454 684 Gene3D - 225 373 - -
Apr1g2454 684 SUPERFAMILY Sec63 N-terminal domain-like 244 450 - -
Apr1g2454 684 PANTHER SEC63 DOMAIN-CONTAINING 1 677 - -
Apr1g2454 684 SMART Sec63_2 209 604 IPR004179 -
Apr1g2454 684 ProSiteProfiles dnaJ domain profile. 99 164 IPR001623 -
Apr1g2454 684 CDD DnaJ 99 153 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2454 Apr-Chr1 34167778 34175838 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2454 K09540 - gmx:100809969 1221.84