Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2449 ATGACTGCGTCCAAGAGAAATTACAAGGACAAACCAATTCGCCGCAAGGAAGAGAAACCGGAAGAACCGGAAGTACCAAAATACAGAGATCGAGCTAAAGAGCGTAGAGAAGATCAAAATCCTGATTATGAACAAACTGAACTTGGATTTCATGCAGTGGCTCCTCCTGGTACTGTAGATCTTCGGTCTTCTGATGCGCACAAGTTATCGATTGAGAAGAGCAAGTACCTCGGAGGTGATGTGGAGCATACCCATTTGGTCAAAGGTTTGGATTATGCTTTGCTGAACAAAGTAAGAAGTGAGATTGATAAGAAGCCAGATGCTGGGGATGATGGTGATGGGAAATCAAGGTCATCTAAGGAAGACCAACAAGTGTCAATCCGAACAGCTACTGCGAAGTCAGTTTATCAGTGGATAGTCAAGCCTCAGACCATTAGTAAAACAAATGAGATGTTCCTTCCTGGTCGAATGACATTTATCTTTAACATGGAGGGTGGATACCATCATGATATTCCAACGACCTTGCACCGTAGTAAAGCTGACTGTCCCGTGCCAGAGGAAATGGTTACAGTTAATGTTGATGGATCTGTTCTAGATCGAATTGCAAAAATAATGTCATATCTTCGTCTTGGTTCTTCTGGGAAGATCCTAAAGAAGAAAAAGAAGGAAAAAGATGCAAAAGGGAAGATTTTGGCTGTTGGTAATGGATATGAAAAAGAAGATAAGACACCGAAGGTTGAAGGTGGACCGAAGAATCAAACTGAAAGAGAAACCTTCTTGCCTCCTCCACCCCCCTTAAAGAAAAATCCTCTCATATCAAGAGAGAAACAAGGCCCAGCTGTTGCTAGAGCAGAAGATGATGACATTTTTGTTGGTGATGGTGTTGAATATGATATACCCAGTAAAGACTTGAGCCAAAGTCCTGTCTCTGAGGACATGGAAGAGTCTCCTAGGAACAAAGAAAAGCCTTCATATTTCACAGAACCTAGTTATGGTCCTGTTCCCCCTTCTATGTTGTCTCAAGGGTGGCAAGAAACAAACGGATATGATGTGATGCAAACACAAGCCTTGGCTAGTGGGTACCAAGGAGAGTGGCAGGAGTACCAGTATGCTGAACAACTGGCTTACCCAGATCAGTATCTTCAGCCAAATATGCAGACTTATGATGTGCAAGCAGGTTTAACTATTCCACATGATCCGCGCTTTATGACTCAAGAAGAGAAGGATCGTGGTTTAGGGTCTGTGTTTAAGCGAGATGACCAGAGACTTCAACAGCTGAGAGAGAAAGATGCTCGTGAAAAAGATCCCAACTTCATCTCAGAGAGTTACTCTGAATGTTACCCAGGGTATCAAGAATATAACCGTGAGATAGTGGACAGCGATGATGAAGATGACTTGTCAAAAATGGATATGGGTGGAAGGGCAAAGGGTCGTCTTCATAGATGGGACTTCGAAACTGAAGAGGAATGGGCCACTTACAATGAACAGAAGGAAGCAATGCCAAAAGCTGCATTCCAGTTCGGTGTAAAGATGCAAGATGGCCGGAAGACCCGAAAGCAAAACAAGGACCAGAAGCTCAATAATGATTTGCACAAGATCAATAAGATACTTTCCAGAAAGAAGATGGAAAAGGACACGAATGGTGAGGTTGGCCACCATTATGATGATGAGCCGCAACCTGGGAAGAAGCTTCGAATATAA 1701 0.4315 MTASKRNYKDKPIRRKEEKPEEPEVPKYRDRAKERREDQNPDYEQTELGFHAVAPPGTVDLRSSDAHKLSIEKSKYLGGDVEHTHLVKGLDYALLNKVRSEIDKKPDAGDDGDGKSRSSKEDQQVSIRTATAKSVYQWIVKPQTISKTNEMFLPGRMTFIFNMEGGYHHDIPTTLHRSKADCPVPEEMVTVNVDGSVLDRIAKIMSYLRLGSSGKILKKKKKEKDAKGKILAVGNGYEKEDKTPKVEGGPKNQTERETFLPPPPPLKKNPLISREKQGPAVARAEDDDIFVGDGVEYDIPSKDLSQSPVSEDMEESPRNKEKPSYFTEPSYGPVPPSMLSQGWQETNGYDVMQTQALASGYQGEWQEYQYAEQLAYPDQYLQPNMQTYDVQAGLTIPHDPRFMTQEEKDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPGYQEYNREIVDSDDEDDLSKMDMGGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLNNDLHKINKILSRKKMEKDTNGEVGHHYDDEPQPGKKLRI* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2449 566 MobiDBLite consensus disorder prediction 103 122 - -
Apr1g2449 566 MobiDBLite consensus disorder prediction 538 566 - -
Apr1g2449 566 Pfam RED-like protein C-terminal region 443 548 IPR012492 -
Apr1g2449 566 Pfam RED-like protein N-terminal region 7 221 IPR012916 -
Apr1g2449 566 MobiDBLite consensus disorder prediction 103 126 - -
Apr1g2449 566 MobiDBLite consensus disorder prediction 235 252 - -
Apr1g2449 566 PANTHER RED PROTEIN IK FACTOR CYTOKINE IK 6 565 IPR039896 -
Apr1g2449 566 MobiDBLite consensus disorder prediction 235 342 - -
Apr1g2449 566 MobiDBLite consensus disorder prediction 1 44 - -
Apr1g2449 566 PANTHER PROTEIN RED 6 565 - -
Apr1g2449 566 MobiDBLite consensus disorder prediction 1 61 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2449 K13109 - gmx:100775354 1009.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2449 1 34135816 34140990 Apr1g2449 1 34135816 34140990 ECH