Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2447 ATGGCGTCGTCGGAAAATGAGACTTCTTCCCACTCTCCTCCTCCTCCTGCACGTGCCTGTATGAACAAGTTTAGGCTCTATGAGACACTATCGAAGTTTTACATGATTGGAAGGGACAAGAGCAGGACATATTGGAGAGTGCTTAAGATTGATCGTCTAGATCCCTCCGAGCTAAATGTGCTTGAAGATTCGACCACTTATACAGAAAGTGAATGTTCTGACCTGTTGAGGCGTATACATGAGGGGAACGTGTCCACAGGTGGATTGAAGTTTGTTACAACTTGTTATGGAATTATTGGATTCATAAAATTTTTGGGGCCTTATTACATGCTGATTATCACAAAAAGAAGGCAAATTGGTGCAATCTGTGGTCATACAGTGTATGCTGTCTCAAAGAGTGAGATGATTCCACTGCAAAATTCTTCTGTCCATTCTAGCATCATGGATTCTAAAAATGAAAACAGATACAAAAAGCTACTATGCATGGTTGACCTTACAAAGGACTTCTTTTTCAGCTACTCATACCATATTATGAGTAGTCTTCAAAGGAACTTGTGTGATAGTGAGACAGGCCATGTCCTTTATGAGACCATGTTTGTCTGGAATGAGTTTTTGACTCGAGGAATTAGGGATCACCTCCAGAATACTATTTGGACAGTTGCACTAGTTTATGGCTTTTTTAAACAGGACACACTTACAATATCTGGGCGGGAGTTCATACTTACACTCATTGCAAGACGGTCTCGACATTTTGCTGGCACTAGGTATTTGAGACGAGGTGTAAATGAGAAGGGAAGAGTAGCTAATGATGTTGAAACTGAACAAATTGTATTTGAGGATGTTCTTGAAGGTGTTCCGGTCCAAATAAGCTCTGTTGTTCAGAACCGGGGTTCAATCCCTCTTTTCTGGTCACAGGAAACTTCACGCTTAAATCTTAAGCCAGATATTATATTGTCAAAGAAGGATCAGAATTATCAAGCCACCAGACTTCACTTTGAAAATCTTGTCAAAAGATACGGGAATCCCATAATAATTTTGAATTTGATAAAGACACACGAGAGGAAGCCTCGTGAATCTATACTTCGTTCTGAGTTTGGTAATGCTATTGATTACATCAACAAAGATTTATTAGAGGAGAACAGGCTGAGGTTTCTTCACTGGGATCTAAAACATTTTCAGAGCAAAGCTACAAATGTTTTGCTACTTTTGGGAAAAGTGGCTGCATATGCTTTGACATTAACTGGTTTTTTCTACTGCCAAGTGGCACCAGACTGTACAAAATGGCCATCAATTGACTTTCAACTCACAAGACAAGATATTGACAATGAAGATGCTAATAATTTAGAGAGGAAACCTTGTGGAGGAAACAACGTTGCTAACGGAAACTGTTCTGCCAAACTGCCCATGTTCCAGATGGGGATTCTCAGAACCAATTGCATAGACTGCTTAGATCGCACAAATGTTGCACAATATGCATATGGGTTGGCTGCTCTTGGCCACCAGCTTCATGCTCTTGGAATTATTGACCACCCAAAAATTGATATTGACGATCCTCTAGGTGATGATTTGATGGGATTTTATGAACGGATGGGTGACACACTTGCACACCAGTATGGTGGTTCGGCTGCACACAACAAGATATTCTCTGAGAGGAGGGGACAATGGAAAGCTGCAACACAATCCCAAGAGTTTTTCAGAACTCTTCAACGCTATTACAGCAATGCTTACATGGACGCTGAGAAGCAAAATGCAATTAACATATTCCTGGGGCATTTTCAGCCACAACTGGGTAAGCCCGCTCTATGGGAGTTGGGCTCAGATGAACATTATGATATAGGGAGAAATGGGGATGATGATGCAAGGTCATTTGTCAAAAGATGTTTCTCAGATGGAAGCATCCTTCGTGACAGCTCTACACCTAAGTCAGCCCAAAATCTGAAGCTTGAAAAATTCTCCAAGTTAGGTTTGTTGGACCAATCAGAAGTAAGCAAGGCTTTTTCTGAGTCATCACCTGAAATATCAATTTCTGAGAGTGACATGTCATTTTCAAGGTACACTTCCCCAATGCCTCGGAGACAACTTTTTGGAGACGTACAAAGAGAGCGCTTCCTCAATAATGATCTTATTTCTTGTTCTGGACATGGGGATTCATTCAGCTGTTCCAACTTTGTTGACCTGGATTGGCTGTCTTCTTCAGGAAATTCATGTGACGACGAGCCATATGGAAGGTCACCGATTACCAACTCTCTGATTACTGGGCTTTCTTCAGAAAATGTTGTTAATGGAGTTATTATGGAAGGAGATACAACTCCCTCCACTAGTGATTTAGACTCAAACATTAAGGGAAGCGAGGGGACTGGGCCAGAGTTATCCTATGGCGATGCACAGTCCAAAGTTCTTGAGGAATTTCCTGATACTTTTGCACACTGGGTGACTTATGGACAGACACTTTGCCATTGA 2460 0.4134 MASSENETSSHSPPPPARACMNKFRLYETLSKFYMIGRDKSRTYWRVLKIDRLDPSELNVLEDSTTYTESECSDLLRRIHEGNVSTGGLKFVTTCYGIIGFIKFLGPYYMLIITKRRQIGAICGHTVYAVSKSEMIPLQNSSVHSSIMDSKNENRYKKLLCMVDLTKDFFFSYSYHIMSSLQRNLCDSETGHVLYETMFVWNEFLTRGIRDHLQNTIWTVALVYGFFKQDTLTISGREFILTLIARRSRHFAGTRYLRRGVNEKGRVANDVETEQIVFEDVLEGVPVQISSVVQNRGSIPLFWSQETSRLNLKPDIILSKKDQNYQATRLHFENLVKRYGNPIIILNLIKTHERKPRESILRSEFGNAIDYINKDLLEENRLRFLHWDLKHFQSKATNVLLLLGKVAAYALTLTGFFYCQVAPDCTKWPSIDFQLTRQDIDNEDANNLERKPCGGNNVANGNCSAKLPMFQMGILRTNCIDCLDRTNVAQYAYGLAALGHQLHALGIIDHPKIDIDDPLGDDLMGFYERMGDTLAHQYGGSAAHNKIFSERRGQWKAATQSQEFFRTLQRYYSNAYMDAEKQNAINIFLGHFQPQLGKPALWELGSDEHYDIGRNGDDDARSFVKRCFSDGSILRDSSTPKSAQNLKLEKFSKLGLLDQSEVSKAFSESSPEISISESDMSFSRYTSPMPRRQLFGDVQRERFLNNDLISCSGHGDSFSCSNFVDLDWLSSSGNSCDDEPYGRSPITNSLITGLSSENVVNGVIMEGDTTPSTSDLDSNIKGSEGTGPELSYGDAQSKVLEEFPDTFAHWVTYGQTLCH* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2447 819 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED 1 819 - -
Apr1g2447 819 MobiDBLite consensus disorder prediction 768 790 - -
Apr1g2447 819 Pfam SacI homology domain 96 391 IPR002013 GO:0016791
Apr1g2447 819 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 1 819 IPR043573 GO:0043813|GO:0046856
Apr1g2447 819 MobiDBLite consensus disorder prediction 768 785 - -
Apr1g2447 819 ProSiteProfiles Sac phosphatase domain profile. 160 540 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2447 Apr-Chr1 34113021 34129192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2447 19 819 Acyl Lipid Metabolism Gene Families AT5G20840 61.876 0.0 983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2447 K22913 - gmx:100527906 1372.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2447 1 34113021 34129192 Apr1g2447 1 34113021 34129192 ECH
Apr9g2423 9 31643888 31655728 Apr1g2447 1 34113021 34129192 PCT