Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2432 ATGGCTCCTTTGAATAGTTTCGTCTGCATTTGCTTTCTTAGCTTTCTTCTCTGTGGCATCAATGCCGTTCAAGTCACTCATGATGGAAGAGCCATCAAACTTGATGGAAAAAGGAGGGTGCTAATATCTGGATCAATTCATTATCCTAGAAGCACACCTCAGATGTGGCTCGATTTGATTAAGAAAGCAAAAGATGGAGGATTGGATGCTGTTGAAACATATATTTTTTGGAATGCTCATGAACCTGTTCGTCGTCAATATGATTTCACTGGCAATAACGATTTTATTAGATTTCTCAAAACCATTCAAGAGGAAGGACTTTATGCTGTACCTCGCATTGGCCCCTATGTTTGTGCTGAATGGAATTATGGAGGGATCCCTGTATGGGTTCATAATCTACCCGGTGTCGAGATTCGGACGGCAAATCAAGTGTTCATGAATGAAATGCAAAATTTTACGACTTTGATTGTGGATATGGTAAAAAAAGAAAAATTGTTTGCATCTCAAGGCGGTCCCATAATTTTATCTCAGATCGAAAACGAATACGGGAATGTGATGTCCGCTTATGGGGATGCTGGCAAAGTTTATATAGATTGGTGTGCTAAC 606 0.3977 MAPLNSFVCICFLSFLLCGINAVQVTHDGRAIKLDGKRRVLISGSIHYPRSTPQMWLDLIKKAKDGGLDAVETYIFWNAHEPVRRQYDFTGNNDFIRFLKTIQEEGLYAVPRIGPYVCAEWNYGGIPVWVHNLPGVEIRTANQVFMNEMQNFTTLIVDMVKKEKLFASQGGPIILSQIENEYGNVMSAYGDAGKVYIDWCAN 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2432 202 PANTHER BETA-GALACTOSIDASE 7 202 - -
Apr1g2432 202 PANTHER BETA-GALACTOSIDASE RELATED 7 202 IPR001944 GO:0004553|GO:0005975
Apr1g2432 202 SUPERFAMILY (Trans)glycosidases 24 201 IPR017853 -
Apr1g2432 202 Gene3D Glycosidases 22 202 - -
Apr1g2432 202 Pfam Glycosyl hydrolases family 35 33 201 IPR031330 -
Apr1g2432 202 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 170 182 IPR019801 GO:0004553|GO:0005975
Apr1g2432 202 PRINTS Glycosyl hydrolase family 35 signature 35 52 IPR001944 GO:0004553|GO:0005975
Apr1g2432 202 PRINTS Glycosyl hydrolase family 35 signature 56 74 IPR001944 GO:0004553|GO:0005975
Apr1g2432 202 PRINTS Glycosyl hydrolase family 35 signature 111 130 IPR001944 GO:0004553|GO:0005975
Apr1g2432 202 PRINTS Glycosyl hydrolase family 35 signature 168 183 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2432 Apr-Chr1 33936209 33937265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2432 13 202 Glycoside Hydrolase AT1G31740 74.490 1.25e-105 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2432 - - vun:114162705 355.91