Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2424 ATGGCAGAGGAATTTTCGAAGGCGGTGGAGGAGGGACTCAGACTCTCGAAGCGCATATACTTCGGCAATGACAGGGCGGTGTCGCCCCCCAAGCCTCCACCAAGCATGGTCAAGTCCCACACCGCGTACCTTCCACGCGCTCCCATGCTCTACGCCGTTATTGGTGACCCTGGCATCGTCGACAACCCTGATGTTCCAAGCTATCAGCCCTATGTGCATGGTAAGTGTGACCCTCCTGCGCTCATTCCCCTCCACATGATTGGTGTTGACCTTGGAGTCGATTGCTACCTCGACACTGCGTTCGTCACCGTCGCTGGCTCATGGAGGCTACACTGCGTCTCCGGCAGCCGCAGCTGCGATTGCCTCGTCGCCGTTCCCATGGGCCCTCAGGGTTCAATTCTAGGTGTGGAGATTGGTGTTCATAGGAAATCTTATACTACTCAACTGGTTGATATGAAAGACAACAATGGTAAGGTGAATATGATCCAAGCTCAAGATGGAGGTTTTCTCAAGCCCAATGTGTTTACTTTTAATATATCACAGATCCATGGTGGTTCCAATTTATCTGTTAAAATTAGATGGTCCCAGAAGATACTATACTGCAATGATGAGTTCTCCTTGAATGTGCCATTTACCTTTCCTGATTTTGTCAACCCTGTTGGGAAGAAAATGTCAAAGAAAGAAAAGATACAAGTAAACGGGGATACTATTACTGGAAGTGAGCTTCTATCCAAGACAAGTAGTCATCCCCTGAAGCAAGTGAGGCGTAATGCCGGAAGTATGGGTTTCGTGTACGAGTCTGAAGTTCTCTCGTGGTCACAACTTGATTTCAGCTTCTCATATGCTGATTTTTCAAGTCATATAAGTGGTGGTGTTCTGTTGGAATCTGCATCTGTGGATGATTTTGATCAGAGAGATATGTTCTCTATGTACCTTTCTCCTGGAAATCTTCAGAGTAGGAAGGTGTTCAGAAAGGACATCATATTTGTTATTGATATTAGTGGAAGCATGCGGGGAAAACTAATTGATGACACAAAGAATGCACTGTCTATTGCTCTCTCTAAGCTCGATCCAGATGATTCATTTAGTATTATAGCATTTAATGGAGAGATATATCAATTTTCAAACTCAATGGAATTGGCTTCAAAGGATGCTGTTGAAAGGGCCATTGAGTGGATTAACATAAATTTTATTGCAGGGGGTGATACAAATATTTTGCATCCCTTGAACACGGCAATAAAGATGCTGTCCGATTCTCGAAATTCAGTTCCAATTATTTTCCTAGTTACAGATGGAACTGTCGAAGATGAGAGACAAATATGTGAAGCGATGAAGAAACATATGATCAATGGAGAGTCAATATCCCCCCGCCTTTACACTTTAGGCATAGGTTCATTCTGCAATCATTATTTCTTGCGTATGCTTGCCATGATCGGTAGGGGCCAACATGTTGCAGCATTGGATGTAGATTTGATTGAGCATCAGATGCTGAAATTGTTTGACAAAGCTTCATCTCTTGTTTTTTCAAATATCACAATGGACATATTCGATGAACTGGATGAAGTTGAGGTGTACCCCTCTCATATTCCAGATCTTTGCTCAGATGGTCTAATGATTTTATCTGGAAGATACAAAGGAAATTTTCCCAAAGCTCTTGAAATTAAAGGTGTCTTGGCTGATTTCAGTAATTTTGTGATAGATATGAAGATTCAAGAGGCTAAGGACATACCTGTCCAAAGGATTTGCGCAAGAGATCAAATAGAGCATCTTACTGCTCTATCATGGCTTTTAAAAGATGAAGAACTAGAACAAAAGGTTGCAAAACTAAGCTTACAAACTGGCTTTATGTCCGAGTATACGCGTATGACAATTCTTGAGAATGATCATCTAAAGATAAAGAAGGACAAGGAATCAGATGGAAAGAAGAGCGATCCTCGGAGTGGGGCAACTGTCCAAGGCCAGAGAATGATTTTGCTGCCACACTTGGGTATAGGATTTGGCGACTTGACTGCAACTGCAGAAAACACTTCACCAGGATCTGAAGTCACAAAATTGCCTGATGGGGCTGAAATCTTTATTAAGGCCGCCACAAATTGTTGTGGCAAATTTTGCAATGAATGCTGTTGCATGTGCTGCATCCATGTCTGTACCCGTATAAACAACCAATGTGCAATTGCATTTTCTCAGCTTTGCGTTGGTTTAGGATGCTTCAGCTGCCTCAACTGTTGCTCCGAATTGTGTTGTTATGGAACTGAAAGCTGA 2262 0.4279 MAEEFSKAVEEGLRLSKRIYFGNDRAVSPPKPPPSMVKSHTAYLPRAPMLYAVIGDPGIVDNPDVPSYQPYVHGKCDPPALIPLHMIGVDLGVDCYLDTAFVTVAGSWRLHCVSGSRSCDCLVAVPMGPQGSILGVEIGVHRKSYTTQLVDMKDNNGKVNMIQAQDGGFLKPNVFTFNISQIHGGSNLSVKIRWSQKILYCNDEFSLNVPFTFPDFVNPVGKKMSKKEKIQVNGDTITGSELLSKTSSHPLKQVRRNAGSMGFVYESEVLSWSQLDFSFSYADFSSHISGGVLLESASVDDFDQRDMFSMYLSPGNLQSRKVFRKDIIFVIDISGSMRGKLIDDTKNALSIALSKLDPDDSFSIIAFNGEIYQFSNSMELASKDAVERAIEWININFIAGGDTNILHPLNTAIKMLSDSRNSVPIIFLVTDGTVEDERQICEAMKKHMINGESISPRLYTLGIGSFCNHYFLRMLAMIGRGQHVAALDVDLIEHQMLKLFDKASSLVFSNITMDIFDELDEVEVYPSHIPDLCSDGLMILSGRYKGNFPKALEIKGVLADFSNFVIDMKIQEAKDIPVQRICARDQIEHLTALSWLLKDEELEQKVAKLSLQTGFMSEYTRMTILENDHLKIKKDKESDGKKSDPRSGATVQGQRMILLPHLGIGFGDLTATAENTSPGSEVTKLPDGAEIFIKAATNCCGKFCNECCCMCCIHVCTRINNQCAIAFSQLCVGLGCFSCLNCCSELCCYGTES* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2424 753 CDD vWA_interalpha_trypsin_inhibitor 323 498 - -
Apr1g2424 753 Pfam von Willebrand factor type A domain 325 482 IPR002035 -
Apr1g2424 753 SUPERFAMILY vWA-like 325 496 IPR036465 -
Apr1g2424 753 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 752 - -
Apr1g2424 753 ProSiteProfiles VWFA domain profile. 326 519 IPR002035 -
Apr1g2424 753 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 752 - -
Apr1g2424 753 Gene3D von Willebrand factor, type A domain 325 503 IPR036465 -
Apr1g2424 753 SMART VWA_4 324 504 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2424 Apr-Chr1 33844395 33851245 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2424 - - gmx:100820133 1184.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2424 1 33844395 33851245 Apr1g2424 1 33844395 33851245 ECH
Apr9g2452 9 31898430 31903922 Apr1g2424 1 33844395 33851245 PCT