Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2420 ATGCCACCTTCCAATACGATCAATCTACCTTTCTCTACTGGAAAACGTTGCGTAACAGTGAGCTCAAGCTTGGTTCTAGCAGTTTTAGTTGCTCTCACAGTTCAAGTCTTCTACTTCTCTCCCATAGATCCAATCGTGCTTCATATAAAACCCGCTACTTTAACCAAAAACAACAAATTACAGAATATCATTAAAATTGGAGAAGGATTTTTGAAGGACCCAGAAGATGTTTGTGTGGATAAAGAAGGGATTCTCTATACAGCTACTCGAGATGGTTGGATTAAAAGATTGCGTAAGAATGAAAATTGGGAGAATTGGAAGCATATAGATAGTGATGCTTTGCTTGGAATCACAACCGCAAAAGATGGTGGCCTCATTGTATGCGATGCGGCTAAGGGTTTGCTCAAGGTTACAGAAGAGGATGGTTTCAGTGTTCTCCTTTCACAAGTAAATGGTTCTCAATTAAGGTTTGCGGATGATGTGATAGAAGCATCCGACGGGAATATATATTTCACTGTTGCTAGTAACAAATTTGATCTTCATGAATGGTTTCTGGATATGCTAGAGGCAAGACCCCATGGACAACTTCTCAAGTACAATCCCACGTCAAACGAGACCGTTATTGTTCTTGATAATGTGACATTTCCCAATGGTGTAGCACTCTCTAAGGATGAAGATTATCTTGTGGTTTGTGAAACTTGGAAATATAGATGCCTCAGACACTGGCTAAAAGGAGCAAACAAAGGCATGACAGATATTTTAATTGAAAACCTTCCTGGTGGACCTGATAACATCAATCTTGCTCCTGATGGGTCATTTTGGATCGCTTTGATTCACTTGACTTCTGAAAGACTTGAGTTTTTGCATTACTCTAAGATATCCAAGCACCTGGTTGCTTCATTTCCAACGCTAATAAACTTGGTCAATGGTGCAAGGAAGAAAGCAATGGTGGTGAATGTGGCAACCAACGGCAACATAATCAAAGAGTTTGATGATAATGATGGCAAGGTGATTAATTTTGTAACTTCAGCTTTAGAGTTTGAGGACAACCTTTACCTAGGTAGTCTTAATTCCATGTTTATTGGAAAATTACCACTTTTTAGTACATGA 1110 0.391 MPPSNTINLPFSTGKRCVTVSSSLVLAVLVALTVQVFYFSPIDPIVLHIKPATLTKNNKLQNIIKIGEGFLKDPEDVCVDKEGILYTATRDGWIKRLRKNENWENWKHIDSDALLGITTAKDGGLIVCDAAKGLLKVTEEDGFSVLLSQVNGSQLRFADDVIEASDGNIYFTVASNKFDLHEWFLDMLEARPHGQLLKYNPTSNETVIVLDNVTFPNGVALSKDEDYLVVCETWKYRCLRHWLKGANKGMTDILIENLPGGPDNINLAPDGSFWIALIHLTSERLEFLHYSKISKHLVASFPTLINLVNGARKKAMVVNVATNGNIIKEFDDNDGKVINFVTSALEFEDNLYLGSLNSMFIGKLPLFST* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2420 369 Gene3D - 57 366 IPR011042 -
Apr1g2420 369 PANTHER ABC TRANSPORTER PERMEASE PROTEIN-LIKE PROTEIN 22 366 - -
Apr1g2420 369 SUPERFAMILY Calcium-dependent phosphotriesterase 37 362 - -
Apr1g2420 369 Pfam Strictosidine synthase-like, N-terminal 56 97 - -
Apr1g2420 369 Pfam Strictosidine synthase 163 245 IPR018119 GO:0009058|GO:0016844
Apr1g2420 369 PANTHER STRICTOSIDINE SYNTHASE-RELATED 22 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2420 Apr-Chr1 33815244 33817819 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2420 - - mtr:MTR_2g042430 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2420 1 33815244 33817819 Apr1g2420 1 33815244 33817819 ECH