Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2419 ATGGGCTCAGATAACAAAAGCATGGAGTTTATGAAGGAGATCGGTTTAGGTTCAACCAACATTGGCTCTTATATTAATGGTCAATGGAAAGCCTCTGGTTCTTCTGTCACTTCTCTTAATCCTTCTAACAATCAGACTATTGCTGAAGTGACTGAAGCAACTTTGCAAGATTATGAAGAGGGATTGCAAGCTTGCAGTGAAGCAGCTAAGATATGGATGACTATTCCGGCACCAAAGAGAGGTGAGATTGTAAGACAAATTGGTGAAGCATTAAGGGCCAAATTGGATCCTCTGGGTAGGTTGGTGTCTCTTGAGATGGGAAAAATTCTTCCAGAAGGAATTGGGGAGGTTCAGGAAATTATCGATATGTGTGATTATGCTGTTGGGCTAAGTCGACAATTGAATGGATCAGTTGTACCATCAGAACGTCCTGATCATATGATGCTTGAGTTGTGGAACCCACTAGGAATAGTTGGTGTAATCACTGCTTTCAACTTTCCATGTGCTGTTCTAGGATGGAATGCTTGCATTGCATTAGTCTGTGGTAACTGTGTTGTGTGGAAGGGTGCTCCAACAACTCCTTTGGTAACTATAGCTGTGACAAAGCTAGTAGTTGAAGTTCTTGAGAGGAACAAATTACCTGGTGCAATTTTCACCTCTTTTTGTGGAGGTGCTGAAATTGGTCAGGCAATATCAAAAGACACACGCATTTCTCTGGTTTCATTTACTGGAAGTTCAAAGGTGGGCTTGATGGTCCAGCAAACAGTTAATCAAAGATTTGGAAAATGCTTGCTTGAGTTAAGTGGTAACAATGCAATAATAGTTATGGATGATGCAGACATCAAGCTGGCTGTACGCTCTATTCTGTTTGCAGCTGTGGGTACTGCTGGTCAGCGGTGTACAACTTGCCGTAGACTGTTTCTGCATGAGAGTATTTACACAAATGTACTAGATCAACTTATTGGAGTCTACAAACAAGTCAAAATTGGGAACCCCTTAGAGAAGGGGACTCTAGTTGGGCCCTTGCATACTCGTTCCTCAGTTGATAACTTTGAGAAGGGCATCTCAGTCATAAAATCTCAGGGAGGGAAGATCCTAACAGGTGGATCTGTATTAGAGTCAGAAGGAAATTTTGTACAGCCAACAATTGTTGAGATTTCTCCAGATGCTTCTGTAGTCAAAGAAGAATTGTTCGGTCCAGTTCTATATGTGATGAAATTTCAGACTCTGGAAGAAGCAATTGCCTTGAACAATTCTGTACCTCAAGGATTGAGCAGTTCAATCTTTACAAAAAGACCTGAAGCTATATTCAAATGGATTGGGCCACGAGGTAGTGATTGTGGTACAGTGAATGTGAACATACCAACAAATGGAGCTGAGATTGGTGGTGCCTTTGGTGGAGAAAAGGCAACAGGTGGTGGTCGTGAAGCGGGTAGTGACTCCTGGAAGCAATACATGAGGCGTTCTACTTGTACCATCAATTATGGAAGTGAACTACCATTAGCTCAGGGGATAAACTTCGGCTAG 1527 0.4217 MGSDNKSMEFMKEIGLGSTNIGSYINGQWKASGSSVTSLNPSNNQTIAEVTEATLQDYEEGLQACSEAAKIWMTIPAPKRGEIVRQIGEALRAKLDPLGRLVSLEMGKILPEGIGEVQEIIDMCDYAVGLSRQLNGSVVPSERPDHMMLELWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLVTIAVTKLVVEVLERNKLPGAIFTSFCGGAEIGQAISKDTRISLVSFTGSSKVGLMVQQTVNQRFGKCLLELSGNNAIIVMDDADIKLAVRSILFAAVGTAGQRCTTCRRLFLHESIYTNVLDQLIGVYKQVKIGNPLEKGTLVGPLHTRSSVDNFEKGISVIKSQGGKILTGGSVLESEGNFVQPTIVEISPDASVVKEELFGPVLYVMKFQTLEEAIALNNSVPQGLSSSIFTKRPEAIFKWIGPRGSDCGTVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGSELPLAQGINFG* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2419 508 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 20 505 - -
Apr1g2419 508 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 36 485 IPR016162 GO:0016491
Apr1g2419 508 CDD ALDH_F7_AASADH 24 496 - -
Apr1g2419 508 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 460 IPR016163 GO:0016620
Apr1g2419 508 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 20 505 IPR044638 GO:0004029
Apr1g2419 508 Pfam Aldehyde dehydrogenase family 33 488 IPR015590 GO:0016491
Apr1g2419 508 SUPERFAMILY ALDH-like 18 497 IPR016161 GO:0016491
Apr1g2419 508 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2419 Apr-Chr1 33807914 33813623 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2419 1 508 Acyl Lipid Metabolism Gene Families AT1G54100 81.102 0.0 866
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2419 K14085 - gmx:100811186 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2419 1 33807914 33813623 Apr1g2419 1 33807914 33813623 ECH