Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2418 ATGACTATGATGCCTATAATTAGCAAACTATACTGTTCATCCTCTCAGACGATGCTTGGGGTCAGGAGGAGGCCACATGTGGTGAATGGTGGGGGTTTTGTAGTCACGGATTTTAGTAGCCAGAAGGTTGTTTTCAAGGTTGATGGTTGTGGTATTCATGGCACAAAGGGACAATTGGTTCTAAGAGATGGGGAAGGAGATGCTATTCTTCTCATGCGGCGAAAGGGAGGCATGGTTGAGGTCCTTAGCATTTACAAGAAGTGGAAAGTCTATAGTCTAGACTATGAAGGAGAGCAGAGCCTGGTTTTCAGCTTGAAAGAACCCAATTCTTGTTTTGTTCCAAACAATGGGATCAGAATCTCCGTTGAGCCCAGGGCTTCAAGTAGCAAAGGCTGGGACTTTGAGATCACGGGCTATTTCCCTGATAGGAATTGTAGCATTGTTGATGTTAGAGGCAACGTTGTAGCCCAGGTTGGGGTGAATAAGGAAGTGGAGAAATTGATGGGAAGCAAGGATCTGTATCATGTGGTGGTGAAACCCGGGATGGATCAAGTTTTCGTTTTTGGAGTCATCGCCATCCTTGACTACATTTATGGTGAATCCACGTACTGCTAG 615 0.4537 MTMMPIISKLYCSSSQTMLGVRRRPHVVNGGGFVVTDFSSQKVVFKVDGCGIHGTKGQLVLRDGEGDAILLMRRKGGMVEVLSIYKKWKVYSLDYEGEQSLVFSLKEPNSCFVPNNGIRISVEPRASSSKGWDFEITGYFPDRNCSIVDVRGNVVAQVGVNKEVEKLMGSKDLYHVVVKPGMDQVFVFGVIAILDYIYGESTYC* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2418 204 Gene3D - 5 202 IPR038595 -
Apr1g2418 204 SUPERFAMILY Tubby C-terminal domain-like 4 198 IPR025659 -
Apr1g2418 204 PANTHER PROTEIN LURP-ONE-RELATED 6 4 203 - -
Apr1g2418 204 Pfam LURP-one-related 6 193 IPR007612 -
Apr1g2418 204 PANTHER - 4 203 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2418 Apr-Chr1 33801404 33802586 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2418 - - gmx:100810645 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2418 1 33801404 33802586 Apr1g2418 1 33801404 33802586 ECH
Apr9g2455 9 31925071 31926326 Apr1g2418 1 33801404 33802586 PCT