Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2411 ATGGTGGCCATGGGCGGCACCACCACCAAGAGAATAGAAACTTACGAAGAGTTCGTGAAAGTTCACGCGCTGCCACTCGCGGCGTCAGGGTTGCCGGAGACACTGCACCGCCGACTTTTCGAGAAGCTATCTGGCGAGACCTTCGACGGCGGCGACCACTTCCAGATCGAGCCATGCGAAGAAGGTCGTCAGAGGCTCCTCGTTCTCACCTCGGAATCCATGGGGAAGGACTCCAACGTCTTCCTGATCGATCACGCATGGACTTTCAGACTCTCCGACGCATATAAGCAGCTGCATGAGGTTCCAGGATTGGCGGAGAGGATGGGTTCCTTGATGTGTGTGGATATTGACGTGAATTTGAATGGCAATGATGATGGTGATGCTGAAGCTGAAGTGAATGGTGAGCGTGGTGTTGTGGATATTTTGGAGAGTGATGTTCGAGAAGCAAAAGAGAAAGGAGATGGCACGTTGAGATGGTTGGAGCTTGAAGGGCTTGACATTGATGATGAAATGCTTCTTTCTCTAGCTTTGCCTAATAGGTTTCCGAATTTAGTGGCACTTAGCTTGTTTGGAAACAAGCTCAACAGAGCTGAAGTAGTTGTTCAAGAAGTTGTCAAATTTAAGCATCTTAAAGGACTCTGGCTCAACAATAACCCGGTTCTTAAAAATTGTGATGGTGAGCTTGTAGATGTAATTCTTAAGGAGTTGCCAGAACTAGAAATATATAATTCAAGCTTCACAAGCAATTTTGGGGAGTGGGCCTTGGGCTTTTGTGCAGGGATATATGGAAAGGATAACCCTGGAAATGCTGATCAGGCTGACAATACACTGCACAGTGTGTCTACTCTTGACCTTTCAAATAGAAGCATTCCCAATTTAATCAACGAGGCATTTTCACCCATTTGTTTGCCATCTCTTTCATACTTGAACATACGTGGAAATCCATTGGAGCAAAACTCAGTTGGTGACTTGTTAGATCTGCTGAGGAGATTCCCTTGCTTACGTTCATTGGAGGTGGATATTCCTGGTCCACTTGGAGGGAGTGCCGTTAAAATTCTGGAATCTCTTCCGAACATTTCTGAGCTAAATGGTATCAGTGCATCTAAAATACTGGAAACTGGAAAGCATGTTATTGATTCCATGCTTCTTCCTCGACTTCCTGAATGGACTCCTGATGAGCCACTTGCGGACCGTATTATAAATGCAATGTGGCAATATCTAATGACTTATAGACTTGCAGATGAAGAAAAGTTAGATGAAACATCTGTATGGTATGTGATGGATGAACTAGGTTCAGCTTTACGGCATAGTGACAAGCCAAATTTCAGAGTGGCACCTTTTCTTTTCATGCCAGAGGGCAATCTGGCATCGGCTGTAAGCTTTTCTATTCTATGGCCAACGCAGAATGTTCAGAAGGATGATGAATGCACTCGTGATTTTCTTCTTGGTATTGGGGAGGATAAACAACGTTCTGCCAGGCTTACTGCATGGTTCCACACGCCACATAACTATTTTATTCAAGCATATGAGAAGCACAATCAGAAATTGCAATCCACGAGTTTATTACCTCCCACTATTCAGTCTTCCGGGAGAAGTATTTGTCAACCTGATAGGTGTCCTTTGCGTGTTTACACAGATATACCTCATGTAGAGGAATACTTGACACATCCTGAGTTTGCAATCACAAAGGAACCAAAAGATGCAGATATAATATGGACAAGTGTGCAGGTAGATGAGGATACCAAAAGGGCCACGGGAATAACGGATCAGCAATACATTAATCAATTTCCTTTTGAGGCATGTCTTGTTATGAAACATCATTTAGCAGAGACAATTCAGAAGGCACATGGATCTCCTCAATGGTTGCAGCCTACTTATAATCTTGAAACACATCTGTCTCAACTTATTGGTGACTATTGTGTACGCAAAAGAGAAGGACTAGACAATCTTTGGATCTTGAAACCCTGGAACATGGCCCGAACTATTGATACTACTGTAACTGATAATTTACCTGCAATAATCCGGCTCATGGAAACTGGTCCTAAGATTTGCCAGAAGTATATTGAACAACCTGCTTTGTTCCAAGGGAAAAAGTTTGATCTCCGTTACATAGTACTGGTTCGGAGCATGCACCCTTTGGAGATATTCCTGTCAGATTGTTTCTGGGTTAGGATAGCCAACAACCAATATTCTTTGGACCGAAGTAGTTTTTTTGAATATGAAACTCACTTCACTGTTATGAATTATCGCGGAAGATTAAATCACAAGAATGTTCAGGATTTTGTGAGGGAATTCGAAGAAGAACATCAAGTTAAATGGTTGGACATACATGCAAGAGTAAGGAATATGATTCGATCAGTGTTTGAAGCAGCAGCTGCTGCACATCCTGAGATGCATAGTCCAACATCAAGGGCAATGTACGGGGTAGATGTCATGTTGGACAGCTCTTTCCAACCTAAGTTATTAGAGGTGACTTACTGCCCGGACTGTACAAGAGCTTGCAAATATGATATGGAGATTGTGGTTGGAGAGGGAGGTGTTGCTAAGGGTTGTGATTTCTTCAACAATGTGTTCAGGTGTCTCTTCTTGAATGAATTTTCACAGGTTAGCCCATTGTAA 2619 0.4307 MVAMGGTTTKRIETYEEFVKVHALPLAASGLPETLHRRLFEKLSGETFDGGDHFQIEPCEEGRQRLLVLTSESMGKDSNVFLIDHAWTFRLSDAYKQLHEVPGLAERMGSLMCVDIDVNLNGNDDGDAEAEVNGERGVVDILESDVREAKEKGDGTLRWLELEGLDIDDEMLLSLALPNRFPNLVALSLFGNKLNRAEVVVQEVVKFKHLKGLWLNNNPVLKNCDGELVDVILKELPELEIYNSSFTSNFGEWALGFCAGIYGKDNPGNADQADNTLHSVSTLDLSNRSIPNLINEAFSPICLPSLSYLNIRGNPLEQNSVGDLLDLLRRFPCLRSLEVDIPGPLGGSAVKILESLPNISELNGISASKILETGKHVIDSMLLPRLPEWTPDEPLADRIINAMWQYLMTYRLADEEKLDETSVWYVMDELGSALRHSDKPNFRVAPFLFMPEGNLASAVSFSILWPTQNVQKDDECTRDFLLGIGEDKQRSARLTAWFHTPHNYFIQAYEKHNQKLQSTSLLPPTIQSSGRSICQPDRCPLRVYTDIPHVEEYLTHPEFAITKEPKDADIIWTSVQVDEDTKRATGITDQQYINQFPFEACLVMKHHLAETIQKAHGSPQWLQPTYNLETHLSQLIGDYCVRKREGLDNLWILKPWNMARTIDTTVTDNLPAIIRLMETGPKICQKYIEQPALFQGKKFDLRYIVLVRSMHPLEIFLSDCFWVRIANNQYSLDRSSFFEYETHFTVMNYRGRLNHKNVQDFVREFEEEHQVKWLDIHARVRNMIRSVFEAAAAAHPEMHSPTSRAMYGVDVMLDSSFQPKLLEVTYCPDCTRACKYDMEIVVGEGGVAKGCDFFNNVFRCLFLNEFSQVSPL* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2411 872 SUPERFAMILY RNI-like 156 363 - -
Apr1g2411 872 PANTHER TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 9 871 IPR027749 -
Apr1g2411 872 Gene3D Ribonuclease Inhibitor 262 369 IPR032675 -
Apr1g2411 872 Pfam Tubulin-tyrosine ligase family 590 840 IPR004344 GO:0036211
Apr1g2411 872 Gene3D Ribonuclease Inhibitor 138 249 IPR032675 -
Apr1g2411 872 ProSiteProfiles TTL domain profile. 536 872 IPR004344 GO:0036211
Apr1g2411 872 Gene3D - 666 844 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2411 K16609 - gmx:100809212 1568.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2411 1 33723019 33728401 Apr1g2411 1 33723019 33728401 ECH