Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2408 ATGGCTCACAATAACAATAACCCCAACAACGTCGTGGATGGCTTTACTCACCGAGTCAACAGCCCGCGTTACACGGGTTCAATGACTCGTCGAGCTCACTCGTTCAAGCGCAGCAGCAACAATAACAGTGGAAGTGCTGTTAATGAGATTGAGCTTCAAATCAACTCACCTAGATCCCCCTTGGGTTCTGCTACTGCAGCTGAAGGCTTGTCCTTGGATCCTGTTTTGAAGAGGAAGCATCATCATCATCATCGTGTGAGCCATAAGGAGAGGAACAAGAAGCTTGGACATTGGATGTTCTTGCTGTTCTGTGGGGAACAATTTGATTCCATTACTAGTCAAAATCTGAAGGATCAAAGTTCCCATGGTTATGCATTTAGGGAGGGAGCAAGTGATGTTGAACGAACTCTAAAGATGGTAGCTACAGGAATTATTGATAGCCAGACTGGCATTGCTGAAGAATCTGGTATATGGTCTAATCCCAACTATGAGAATTTCTCCCAATGCATAGACCTGCAAAGAAATCATAAGAAGCTGAATGTGAAAACCAATGGCTACATTCTTGTAAATGCTAATGGTGGCCTGAATCAGATGAGATTTGGGATATGTGATATGGTTGCTGTTGCTAAGATTATGAAGGCAACACTTGTTCTTCCTTCTCTCGATCACACCTCCTACTGGGCTGATGCGAGTGGCTTCAAGGATTTGTTTGACTGGAAACATTTTATTGAGACACTGAAGGATGATATCCACGTAGTTGAGACACTGCCACCTGCCTATGCTGAAATTGAACCTTTCCCAAAAACGCCAATATCTTGGTCTAAGGCCAGTTATTACAAGACTGATGTTCTTCCCCTCCTAAAGCAGCACAAAGTGATCTATTTCACCCATACTGATTCCAGGCTTGCTAATAATGGAATTCCAAGTTCCATAGAAAAACTAAGATGTCGTGTAAATTATAGAGCATTGAAATATTCAGCTCCGATTGAAGAATTTGGAAACAAATTGGTATCTAGAATGCGACAGAACAAAATTCCGTATCTTGCACTTCATTTGAGGTATGAGAAGGATATGCTTGCATTTACAGGCTGCAGTCACAATTTGACTGCAGAAGAAGATGAAGAACTACGACAGATGCGGTATGAAGTTGGTCATTGGAAGGAGAAGGAGATTAATGGGACTGAGAGGAGATTGATTGGAGGTTGTCCATTAACGCCAAGGGAAACTTCCTTACTGCTTAGAGCACTTGGTTTTCCATCACAAACCAGAATTTATCTGGTAGCTGGAGAAGCATATGGAAGAGGAAGCATGAAATATCTCAAGGATGATTTTCCCAACATTTTCTCTCATTCCTCTCTGTCTTTAGAAGAAGAGTTGAATCCTTTCAAGAATCACCAGAACATGTTAGCTAGTATAGACTACATTATTGCCCTTCAGAGTGATGTATTTCTTTATACTTATGATGGAAATATGGCAAAGGCAGTACAAGGTCATAGGCGCTTTGAACACTTCAAGAAGACCATCAATCCAGACAAGATAAATTTTGTGAAACTAGTTGATAAGTTGGATGAAGGGAAAATTTCTTGGAAGAAGTTCAGCTCTAAGGTGAAAAAGCTTCATGAAGACCGTGTTGGTGCTCCATATCCTAGGGAGCGCGGAGAATTTCCTAAGCTGGAGGAAAGTTTTTATGCAAATCCTCTGCCAGGTTGTATCTGTGAAACAAGATTGGAGTAG 1734 0.4146 MAHNNNNPNNVVDGFTHRVNSPRYTGSMTRRAHSFKRSSNNNSGSAVNEIELQINSPRSPLGSATAAEGLSLDPVLKRKHHHHHRVSHKERNKKLGHWMFLLFCGEQFDSITSQNLKDQSSHGYAFREGASDVERTLKMVATGIIDSQTGIAEESGIWSNPNYENFSQCIDLQRNHKKLNVKTNGYILVNANGGLNQMRFGICDMVAVAKIMKATLVLPSLDHTSYWADASGFKDLFDWKHFIETLKDDIHVVETLPPAYAEIEPFPKTPISWSKASYYKTDVLPLLKQHKVIYFTHTDSRLANNGIPSSIEKLRCRVNYRALKYSAPIEEFGNKLVSRMRQNKIPYLALHLRYEKDMLAFTGCSHNLTAEEDEELRQMRYEVGHWKEKEINGTERRLIGGCPLTPRETSLLLRALGFPSQTRIYLVAGEAYGRGSMKYLKDDFPNIFSHSSLSLEEELNPFKNHQNMLASIDYIIALQSDVFLYTYDGNMAKAVQGHRRFEHFKKTINPDKINFVKLVDKLDEGKISWKKFSSKVKKLHEDRVGAPYPRERGEFPKLEESFYANPLPGCICETRLE* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2408 577 PANTHER OS02G0726500 PROTEIN-RELATED 76 575 - -
Apr1g2408 577 PANTHER O-FUCOSYLTRANSFERASE 28 76 575 - -
Apr1g2408 577 MobiDBLite consensus disorder prediction 1 22 - -
Apr1g2408 577 Pfam GDP-fucose protein O-fucosyltransferase 186 501 IPR019378 -
Apr1g2408 577 CDD O-FucT_plant 186 507 IPR024709 -
Apr1g2408 577 PIRSF UCP009360 63 575 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2408 Apr-Chr1 33702852 33708820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2408 157 572 Miscellaneous Gene Families AT2G37980 66.587 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2408 - - gmx:100807090 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2408 1 33702852 33708820 Apr1g2408 1 33702852 33708820 ECH
Apr9g2467 9 32016771 32021580 Apr1g2408 1 33702852 33708820 PCT