Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2400 ATGGAAGGAGACACATTCTCTGGTCTTGGCAATGGTACCAACATTGATACCAAGATCTTGCATACATTTCAGAAGAGCTTTGTTCAAGTCCAGAACATCTTGGATCAGAATAGGTTACTCATCAATGAGATAAACCAGAATCATGAGTCCAAGGTTCCTGACAACCTTAGCAGGAATGTGGGCCTTATTAGGGAGCTCAACAACAATATCAGAAGAGTGGTTGACTTATATGCAGATCTTTCAAGTTCCTTTACCAAATCCATGGAAGTTACTTCTGAAGGGGACTCCAATGGTGCTGTGAATTCAGATGGGAAAGGTGTCCACAAGAGACACAGGCCTACATAG 345 0.4232 MEGDTFSGLGNGTNIDTKILHTFQKSFVQVQNILDQNRLLINEINQNHESKVPDNLSRNVGLIRELNNNIRRVVDLYADLSSSFTKSMEVTSEGDSNGAVNSDGKGVHKRHRPT* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2400 114 PANTHER PROTEIN ELF4-LIKE 3 1 113 - -
Apr1g2400 114 MobiDBLite consensus disorder prediction 89 114 - -
Apr1g2400 114 PANTHER PROTEIN ELF4-LIKE 4 1 113 IPR040462 GO:0042753
Apr1g2400 114 Pfam Early Flowering 4 domain 15 95 IPR009741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2400 Apr-Chr1 33625200 33626912 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2400 - - ccaj:109808760 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2400 1 33625200 33626912 Apr1g2400 1 33625200 33626912 ECH
Apr9g2476 9 32091902 32094759 Apr1g2400 1 33625200 33626912 PCT