Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2386 ATGTCGGACAACGAAAACCATGCGGACTATACATACAACGAATCCTCTGCAAAGACCAAGCGCAGGTTCAGGGACAGGTCCAAGGAGGTATTGTCCAAACAAGCTGTTAAGATAGCCAAACAAGCTGAAGAACACGAAAGGTTCATCAACAAGGTGACTCATCTATTGGGGGTTCTTAGCTTTGGTGGGTTTTGCTTTCTGTTGGGGGCAAGACCACAAGACGTTCCATTAGTATATTGTTTGTTCTATGTCGTCTTTGTTCCTCTTCGATGGATATATTATAGGTTCAAGAAATGGCACTACTATCTCCTGGGGCCATTAGCATGGGCTTTGATTGTTTGGCGCTGCAGCTTGGTTTTCAGTTCTGTTGACAAAATTGTTAGTGTTCTTATCCATCTTTTACCAGGAATGGTTTTCTTTACCATTCGATGGTGGAATCCTGCAACCTTAGTAGCCATGCAACCAGAGGGAACGGGTGGAAGAGCTGCATGGCCGTGTATTGAAGATAAAACCTTTCTCTGGACATGGCTGTTTCTGGTTCCCTTAGCAGCTTACACGCTCTGGCAGGTTATGTATTTCCTCATTGTCAACGTCTTGCGCCGGCGACGGCTTTTAAGAGATCCTGAAGTCATGACTTCTTACAGAGAACTCTCCAATAAAGCACAGAAAGCAAACAACATGTGGTGGCGCTTAAGTGGCATACTTGGGGATCAAAATCGCTTGCTAATGTACATTGTTCTTCAAGGGATATTTACTGTGGCAACCACGGCACTCACTGTTCCCATATTCTTGTCATATGAGTTGTCTGTAGTTTTCCAAATACTGAAGGTTTCTGCAGCAGTATGGAATGGGGGGAGCTTTCTGTTAGATGTAATGCCTAGGCAGGTAATTCTCAAGGAGAAAAAGAAATCAGAGATGCAACCTGTTCAAATTCAAAAGGATCAGTGA 948 0.4388 MSDNENHADYTYNESSAKTKRRFRDRSKEVLSKQAVKIAKQAEEHERFINKVTHLLGVLSFGGFCFLLGARPQDVPLVYCLFYVVFVPLRWIYYRFKKWHYYLLGPLAWALIVWRCSLVFSSVDKIVSVLIHLLPGMVFFTIRWWNPATLVAMQPEGTGGRAAWPCIEDKTFLWTWLFLVPLAAYTLWQVMYFLIVNVLRRRRLLRDPEVMTSYRELSNKAQKANNMWWRLSGILGDQNRLLMYIVLQGIFTVATTALTVPIFLSYELSVVFQILKVSAAVWNGGSFLLDVMPRQVILKEKKKSEMQPVQIQKDQ* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2386 315 PANTHER - 19 104 - -
Apr1g2386 315 PANTHER - 105 311 - -
Apr1g2386 315 MobiDBLite consensus disorder prediction 1 26 - -
Apr1g2386 315 Pfam Protein of unknown function (DUF2838) 105 128 IPR021261 -
Apr1g2386 315 Pfam Protein of unknown function (DUF2838) 51 104 IPR021261 -
Apr1g2386 315 PANTHER OS01G0585100 PROTEIN 105 311 IPR021261 -
Apr1g2386 315 PANTHER OS01G0585100 PROTEIN 19 104 IPR021261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2386 Apr-Chr1 33508478 33511808 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2386 - - gmx:100805362 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2386 1 33508478 33511808 Apr1g2386 1 33508478 33511808 ECH
Apr9g2487 9 32155818 32160005 Apr1g2386 1 33508478 33511808 PCT