Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2383 ATGGGGGAAGAAGTGAGCGTTAACGTTTTCCGCAATCGGAACAGTGAAAGCGACGATCAGAACCTTGAATTGGATATTTACCCTTTGAGTAGTTATTACTTTGAATCCAAACTTCCCATTCCCTTCAAAGACCACTCCTTAGCCGATCGTGTTCTCAGGATGAAGTCCAATTATGCTGCCCGTGGAATTCGAACTTGTGTGGAAGCTGTCTTATTGGTGGAATTGTTCAAACATCCACATCTGTTGCTTTTGCAAGTAAGAAATTCCATTTACAAACTTCCTGGTGGTCGTTTAAGGCCAGATGAATCAGATACTGATGGGTTGAGGCGTAAGCTTGTAAGGAAGCTTTCTGTTAATGAAAATGGGGATGGTTCAGAATGGGAGGTGGGTGAATGCCTTGGAATGTGGTGGAGACCTGATTTTGAAGCATTACTGTATCCTTTCTTGCCACCTAACGTAAAACATCCGAAGGAGTGTACAAAACTCTTCCTTGTGAAGCTTCCTGTGAGTCGAAAGTTCGTTGTGCCAAAGAACATGAAGTTGTTAGCTGTCCCATTGTGCCAAATTCATGAAAATCACAAGACATATGGGCCAATTATATCAGGGGTTCCACAGCTGCTGTCAAAATTCTCTTTCAACATGATGGAATCTTAA 654 0.4235 MGEEVSVNVFRNRNSESDDQNLELDIYPLSSYYFESKLPIPFKDHSLADRVLRMKSNYAARGIRTCVEAVLLVELFKHPHLLLLQVRNSIYKLPGGRLRPDESDTDGLRRKLVRKLSVNENGDGSEWEVGECLGMWWRPDFEALLYPFLPPNVKHPKECTKLFLVKLPVSRKFVVPKNMKLLAVPLCQIHENHKTYGPIISGVPQLLSKFSFNMMES* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2383 217 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 23 214 - -
Apr1g2383 217 PIRSF CPSF-25 3 217 IPR016706 GO:0003729|GO:0005849|GO:0006378
Apr1g2383 217 Pfam Nucleotide hydrolase 23 210 IPR016706 GO:0003729|GO:0005849|GO:0006378
Apr1g2383 217 SUPERFAMILY Nudix 64 112 IPR015797 -
Apr1g2383 217 PANTHER PRE-MRNA CLEAVAGE FACTOR IM 25 KDA SUBUNIT 1 11 216 - -
Apr1g2383 217 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 11 216 IPR016706 GO:0003729|GO:0005849|GO:0006378
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2383 Apr-Chr1 33486324 33490090 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2383 K14397 - gmx:100791216 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2383 1 33486324 33490090 Apr1g2383 1 33486324 33490090 ECH