Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2375 ATGGGTGATAGCAGTTCTCCATCTGGGTCTCCAAAAGCAAAACCAGATTCTGTGGTGGATGGAGACTCGGTGGTTTCCAAGGGTGATGCATCGTTGGAAACCATTGTGCAAAGTTTCCAAGATTCAATGTCTCTTGGAAAGAGACATAAGTTCTGGGAAACTCAGCCTGTTGGGCAATACAAGGATGTTGGGGACACAAGCTTGCCTGAAGGGCCCATTGAGCCCCCAACACCTTTGTCTGAGGTCAAGCAGGAACCTTATAACCTTCCAAGTGCTTATGAGTGGACCACATGTGACATGGAATCTGAAGAAATTTGTGAAGAGGTTTACACTCTGCTGAAGAATAATTATGTTGAGGATGATGAGAACATGTTTAGGTTCAACTATTCCAAGGAGTTCCTAAGCTGGGCATTACGTGTGCCCGGTTATTACCGGAGCTGGCACATTGGTGTTCGGGCAAAAGCATCGAAGAAGTTGGTTGCTTTCATTAGTGGTGTCCCTGCCAGAATCAGGGTTAATAAGGAGGTTGTGAAGATGGCAGAGATCAATTTCTTGTGTGTTCATAAGAAGCTTAGGTCAAAGAGGCTTGCCCCTGTTATGATCAAGGAAGTCACCAGGAGGGTTCATTTGGAGAATATCTGGCAAGCTGCTTATACAGCTGGAGTTGTTCTTCCAACGCCAATAACAACTTGTCAGTATTGGCATAGGTCGTTGAATCCAAAGAAGCTTATTGATGTTGGGTTTTCAAGGCTTGGTGCTAGGATGACAATGAGCCGCACTATAAAACTTTACAAGTTACCTGATGCACCAGTTACTCCTGGATTCAGGAAAATGGAGCTTCGGGATGTCCCTGCTGTTACTCGGCTGCTTAGGAACTACTTGAGCCAGTTTGTTGTTGCACCTGATTTTGATGAAAATGATGTTGAGCATTGGCTTCTTCCCAATGAGAATGTGGTGGATAGTTTCTTGGTGGAGAGTCCAGAGAATCATGAGATCACAGACTTCTGCAGCTTCTATACTCTTCCTTCTTCTATCCTTGGAAATCAAACTTACTCCATTTTGAAAGCTGCTTATTCCTATTATAATGTCTCCACCAAAATTCCACTGCCTCAGTTGATGAATGATGCGCTAATTGTGGCAAAGCAAAAGGATTTTGATGTTTTCAATGCCTTGGATGTAATGCACAATGAGAGTTTCCTCAAAGATCTCAAGTTTGGACCAGGAGATGGACAGCTTCACTACTACTTGTACAATTATAGGATTCGTAATGCTTTGAAACCATCAGAACTTGGGCTTGTGCTCTTGTAA 1308 0.435 MGDSSSPSGSPKAKPDSVVDGDSVVSKGDASLETIVQSFQDSMSLGKRHKFWETQPVGQYKDVGDTSLPEGPIEPPTPLSEVKQEPYNLPSAYEWTTCDMESEEICEEVYTLLKNNYVEDDENMFRFNYSKEFLSWALRVPGYYRSWHIGVRAKASKKLVAFISGVPARIRVNKEVVKMAEINFLCVHKKLRSKRLAPVMIKEVTRRVHLENIWQAAYTAGVVLPTPITTCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPDAPVTPGFRKMELRDVPAVTRLLRNYLSQFVVAPDFDENDVEHWLLPNENVVDSFLVESPENHEITDFCSFYTLPSSILGNQTYSILKAAYSYYNVSTKIPLPQLMNDALIVAKQKDFDVFNALDVMHNESFLKDLKFGPGDGQLHYYLYNYRIRNALKPSELGLVLL* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2375 435 Pfam Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain 245 423 IPR022677 GO:0004379
Apr1g2375 435 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 47 232 IPR016181 -
Apr1g2375 435 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 233 435 IPR016181 -
Apr1g2375 435 MobiDBLite consensus disorder prediction 1 25 - -
Apr1g2375 435 PIRSF N-myristl_transf 8 435 IPR000903 GO:0004379|GO:0006499
Apr1g2375 435 Pfam Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain 72 231 IPR022676 GO:0004379
Apr1g2375 435 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 2. 404 410 IPR022678 GO:0004379
Apr1g2375 435 PANTHER N-MYRISTOYL TRANSFERASE 24 435 IPR000903 GO:0004379|GO:0006499
Apr1g2375 435 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 1. 181 189 IPR022678 GO:0004379
Apr1g2375 435 PANTHER GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE 24 435 - -
Apr1g2375 435 Gene3D - 41 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2375 Apr-Chr1 33421972 33423822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2375 1 435 Acyl Lipid Metabolism Gene Families AT5G57020 84.368 0.0 774
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2375 K00671 - gmx:100787291 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2375 1 33421972 33423822 Apr1g2375 1 33421972 33423822 ECH