Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2366 ATGGCAACATCGGTGAAGAACAACTTCATCAACCCAGCATTGGTCTCAAATCTTCAACAAGCACTCGTCCGCAGGAAGGACAGTGTGCAGGAGCAGCACCAGAACAGAACCCACGAACCTCTCAGAGCTTCTTCAAAGCCCGTGGTACTAGTCACCAATGGAGAAGGCATAGACTCTCTTGGCCTCACTTTCCTCGTTGAAGCACTCCTTCGTAATGCCCTTCTTGATGTCTATGTCTGCGCCCCAGAATCGGATAGATCGGTGTGTGGTCACTCAGTTACCACTAAGGAGACGCTAGCTGTGTGTTCAGCAGAAGTTGGTGGTGCCAATGCTTATCAAGTGTCAGGAACCCCAGCAGATTGTGTGTCTTTGGCTTTATCTGGGGCATTGTTTTCTTGGTCAAAACCTATTTTGGTAATTAGTGGACTAAACAAAGGAGCAACTTGTGGTTATAACACGTTGTACTCTGGGGCAGTTGCTGGGGCTAGAGAGGCACTGATTTGTGGTGTGCCATCTCTTTGTATATCATTGAATTGGGAAATGAATGTGAGCTGTGAAATTGATTTGAAGGATGCAGTAACAGCATGTTTACCATTAATTCATGCAGCTATAAGAGATATACAGAAAGGGATTTTTCCCAAGAATTGCTTCCTAAATATAGGGATCCCAAGTAGTCCACTGAGAAACAAGGGTGTCAAAGTGACTAGGCAAAGTCCACAAAGGTCTTCTTTAAGTTGGCAAGCTGTGTCAGCAAATAGGAATCCTTCAGCAGGCCATTACATGTCTAACCAGCAAAGTCTTGGAATCATGTTAGCACAACTAGGAAGAGATGCCTCTGCTGCTGCAGCAGCGCGTCGAATAAACTCGAATCGTAAGAATGTGGAGATTGAATCTGTTGGTGTTTCTGGAAAGCTCAATTCTCAACAAACCGTGAAGAAATACTTCCGTATGGAGTTAACAGAGAAAATGCAGCAGAACATAGAAGAGGATTTAGACTCCACAGCACTTGAAGAAGGATTTGTTACAGTTACCCCTTTGTCATTGTATGCAAATGGACAGATTGAAATTCAATCATCAGTATCCAACTGGTTAGCTATTGCACTCAGTGGTGATCAATGA 1119 0.4406 MATSVKNNFINPALVSNLQQALVRRKDSVQEQHQNRTHEPLRASSKPVVLVTNGEGIDSLGLTFLVEALLRNALLDVYVCAPESDRSVCGHSVTTKETLAVCSAEVGGANAYQVSGTPADCVSLALSGALFSWSKPILVISGLNKGATCGYNTLYSGAVAGAREALICGVPSLCISLNWEMNVSCEIDLKDAVTACLPLIHAAIRDIQKGIFPKNCFLNIGIPSSPLRNKGVKVTRQSPQRSSLSWQAVSANRNPSAGHYMSNQQSLGIMLAQLGRDASAAAAARRINSNRKNVEIESVGVSGKLNSQQTVKKYFRMELTEKMQQNIEEDLDSTALEEGFVTVTPLSLYANGQIEIQSSVSNWLAIALSGDQ* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2366 372 Pfam Survival protein SurE 49 241 IPR002828 GO:0016787
Apr1g2366 372 Gene3D - 40 365 IPR036523 GO:0016787
Apr1g2366 372 SUPERFAMILY SurE-like 48 351 IPR036523 GO:0016787
Apr1g2366 372 PANTHER 5'-NUCLEOTIDASE SURE-LIKE 1 372 - -
Apr1g2366 372 PANTHER 5'-NUCLEOTIDASE SURE 1 372 IPR030048 GO:0008252
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2366 Apr-Chr1 33340566 33343262 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2366 K03787 - gmx:100785738 648.277