Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2365 ATGGTGGTAAGGATTCGTCTATCGCGGTTCGGATGCAAGAACAAGCCATTCTATCGTGTCATGGCTGCTGATAGCAGATCCCCCAGAGATGGCAAGCACCTCGAAGTTCTCGGTTACTACAATCCCTTACCAGGTCAAGATGGTGGCAAAAGAATGGGTCTCAACTTCGATAGAGTCAAGTATTGGCTTTCTGTTGGAGCTCAGCCTTCAGAGCCAGTGGAGCGTCTTCTATTCCGGGCTGGTTTGTTGCCTCCACCACCAATGGTGGCAATGGGGCTAAAAGGTGGACCGCGTGATATGCGTCCGGTAGATGCTTTAACTGGATGTGTTCTGAATCAAGAGAAGCCAGCCAGTGCCAGTAGCAAGGATCATGAGCATGACACTCCTGGAAACCCTTAA 399 0.5038 MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVGAQPSEPVERLLFRAGLLPPPPMVAMGLKGGPRDMRPVDALTGCVLNQEKPASASSKDHEHDTPGNP* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2365 132 Hamap 30S ribosomal protein S16 [rpsP]. 2 80 IPR000307 GO:0003735|GO:0005840|GO:0006412
Apr1g2365 132 SUPERFAMILY Ribosomal protein S16 3 92 IPR023803 -
Apr1g2365 132 MobiDBLite consensus disorder prediction 109 132 - -
Apr1g2365 132 TIGRFAM S16: ribosomal protein bS16 3 82 IPR000307 GO:0003735|GO:0005840|GO:0006412
Apr1g2365 132 Pfam Ribosomal protein S16 9 70 IPR000307 GO:0003735|GO:0005840|GO:0006412
Apr1g2365 132 PANTHER 30S RIBOSOMAL PROTEIN S16 1 114 IPR000307 GO:0003735|GO:0005840|GO:0006412
Apr1g2365 132 MobiDBLite consensus disorder prediction 118 132 - -
Apr1g2365 132 PANTHER 30S RIBOSOMAL PROTEIN S16-LIKE 1 114 - -
Apr1g2365 132 Gene3D - 1 128 IPR023803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2365 Apr-Chr1 33333999 33335058 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2365 K02959 - gmx:100499851 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2365 1 33333999 33335058 Apr1g2365 1 33333999 33335058 ECH