Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2355 ATGGTGGTGAAGAAGCCACGGATTGTGATAATTGGAGCAGGAATGGCAGGTCTCACAGCTGCCAACAAGCTCTACACTGCCACTGCTTCAAAGGACTTGTTTGAGCTGTGTGTTGTAGAGGGTGGAACAAGGATTGGTGGCAGAATCAACACCTCCGAGTTTGGTGGTGACCGTATTGAGATGGGTGCTACATGGATCCATGGAATTGGAGGAAGCCCAATTCACAAAATTGCCCAAGAAACCAACTCACTTCACTCTGACCAACCTTGGGAGTGCATGGATGGTAACCCTGATGATGCCATCACCATTGCTGAAGGTGGTTTCCACCTTCACCCTTCCGTTGTTCACCCCATCACAAAGCTCTTCAACAACCTCATGGATTACTCTCAAGGGAAACTCACTGAAGCCACTGCAAAGGGTGAACTTGACACTTATCATAAGCTGGCTGCTAAAGCTGCTTCCAACATGTCTGGGAACAACGACAACCTTAGTATTGGTTATTTCCTCAGACAAGGCCTTGATGCTTACTTGGGTTCTGTGAAGGAGCATGAGGAGGTGAAAGGGTGTGGGAACTGGAGCAGGAAGTTGCTTCAAGAAGCAATCTTTGCAATGCATGAGAACACCCAGAGGACTTACACTTCAGCTGGTGACCTTTTGAGTCTAGATTATGGGGCTGAAAGTGAGTACATAATGTTCCCGGGTGAAGAAATCACAATTGCTAAAGGGTATGTAAGCATAATTCAGTACTTAGCTTCTGTGTTACCACCTGGTTTAGTTCAGTTAGGTAGAAAGGTCACAAGGATTGAGTGGCAACCTGTGATAGATGACGAGCAGAAGGGTGTGGAAAATAATGGTTGTTGTTCAAGGCCTGTGAAGCTGCATTTCTGTGATGGCTCCTTTATGTCTGCTGATCATGTCATTGTCACTGTTTCACTTGGAGTGTTAAAAGCTGCTATTGGTGATGATTCAGGTATGTTCTGTCCTCCTCTTCCACCTTCCAAGGCTGAGGCAATTTCAAGGCTTGGTTTTGGTGTTGTTAACAAGTTGTTTATGCAACTGAGTCCAACACATGGAGGTGGGAAACATGGACATGAACATGAACAATCCAAAGGGTTTCCTTTTCTTCAAATGGTTTTTCATTCACCTCAATCTGAAATGAGGAACAAGAAAATACCCTGGTGGATGAGAAGAACAGCTACCCTTTTTCCCATCTACACCAATTCTAGTGTCCTCTTGTCTTGGTTTGCTGGAGAAGAAGCACTGGCGCTTGAGTCACTCAAAGATGAAGAGATCATCAATGGGGTTTCATCCACTGTCTCGTGCTTTCTACCACAGTGGCAAAAAGGTTCAAGTCCACATAAATTGTGCAATGGGAATGTGAGTTCTGAGGAGAGATCTCAACAAAATGAAGTTCAGTTCAGTGAAGTCTTGAAGAGCAAATGGGGGACTGATCCATTATTTTTAGGCTCATACAGTTATGTTGCAGTAGGATCAAGTGGTGATGACTTAGATACAATGGCAGAGCCATTGCCAAAAGATAGCTGTTGTCATCCTTCTCCACTTCAAATTTTGTTTGCAGGAGAAGCAACTCACAGAACTCATTATTCTACAACTCATGGTGCTTACTTCAGTGGTCTTAGAGAAGCTAATAGGCTTCTTCAACATTATCATTGTGTTGGGATTTATAACAACTAG 1695 0.4407 MVVKKPRIVIIGAGMAGLTAANKLYTATASKDLFELCVVEGGTRIGGRINTSEFGGDRIEMGATWIHGIGGSPIHKIAQETNSLHSDQPWECMDGNPDDAITIAEGGFHLHPSVVHPITKLFNNLMDYSQGKLTEATAKGELDTYHKLAAKAASNMSGNNDNLSIGYFLRQGLDAYLGSVKEHEEVKGCGNWSRKLLQEAIFAMHENTQRTYTSAGDLLSLDYGAESEYIMFPGEEITIAKGYVSIIQYLASVLPPGLVQLGRKVTRIEWQPVIDDEQKGVENNGCCSRPVKLHFCDGSFMSADHVIVTVSLGVLKAAIGDDSGMFCPPLPPSKAEAISRLGFGVVNKLFMQLSPTHGGGKHGHEHEQSKGFPFLQMVFHSPQSEMRNKKIPWWMRRTATLFPIYTNSSVLLSWFAGEEALALESLKDEEIINGVSSTVSCFLPQWQKGSSPHKLCNGNVSSEERSQQNEVQFSEVLKSKWGTDPLFLGSYSYVAVGSSGDDLDTMAEPLPKDSCCHPSPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCVGIYNN* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2355 564 Gene3D - 292 498 - -
Apr1g2355 564 PANTHER FLAVIN MONOAMINE OXIDASE 1 560 - -
Apr1g2355 564 SUPERFAMILY FAD/NAD(P)-binding domain 3 556 IPR036188 -
Apr1g2355 564 Pfam Flavin containing amine oxidoreductase 15 553 IPR002937 GO:0016491
Apr1g2355 564 PANTHER POLYAMINE OXIDASE 5-RELATED 1 560 - -
Apr1g2355 564 SUPERFAMILY FAD-linked reductases, C-terminal domain 342 493 - -
Apr1g2355 564 Gene3D - 2 144 IPR036188 -
Apr1g2355 564 Gene3D - 506 561 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2355 Apr-Chr1 33213550 33216928 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2355 K12259 - gmx:100783032 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2355 1 33213550 33216928 Apr1g2355 1 33213550 33216928 ECH
Apr9g2522 9 32416641 32419448 Apr1g2355 1 33213550 33216928 PCT