Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2348 ATGGCTGCTGCATCTGCAAGAGTCACCATAACTGCACTGCTTCTTATAGCTTTAGCAACGACCTCTCTTCATTCTCTTCAAGCTTCATCCGTTGGTCAATTCGTTGACGAAACCATCTCTTCTCACAGCGTCGTCATCTTTTCCAAGACTTATTGCCCGTACTGTAAAAGAGCAAAGGCTGTTTTCAAAGAGTTGAACCAAGTTGCGCATGTCGTTGAGCTTGATGAGAGAGATGATGGTTCAAAGATTCAGGATATCTTGGTTAATATTGTTGGGAGGCGTACTGTGCCACAAGTTTTCATTAATGGAAAACACCTTGGAGGCTCAGATGAAACCGTTGAAGCTTATGAGAGGGGACGTCTGGCTAAACTTCTAGGAATTGAGACAACGGATCATGAAGATCTCTGA 408 0.4363 MAAASARVTITALLLIALATTSLHSLQASSVGQFVDETISSHSVVIFSKTYCPYCKRAKAVFKELNQVAHVVELDERDDGSKIQDILVNIVGRRTVPQVFINGKHLGGSDETVEAYERGRLAKLLGIETTDHEDL* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2348 135 ProSitePatterns Glutaredoxin active site. 46 61 IPR011767 -
Apr1g2348 135 TIGRFAM GRX_euk: glutaredoxin 44 125 IPR011899 -
Apr1g2348 135 Gene3D Glutaredoxin 21 126 - -
Apr1g2348 135 PRINTS Glutaredoxin signature 44 62 IPR014025 -
Apr1g2348 135 PRINTS Glutaredoxin signature 89 102 IPR014025 -
Apr1g2348 135 PRINTS Glutaredoxin signature 103 116 IPR014025 -
Apr1g2348 135 ProSiteProfiles Glutaredoxin domain profile. 32 132 - -
Apr1g2348 135 PANTHER GLUTAREDOXIN 2 11 122 - -
Apr1g2348 135 CDD GRX_GRXh_1_2_like 44 124 - -
Apr1g2348 135 SUPERFAMILY Thioredoxin-like 33 125 IPR036249 -
Apr1g2348 135 PANTHER BNAA02G04900D PROTEIN 11 122 - -
Apr1g2348 135 Pfam Glutaredoxin 44 105 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2348 Apr-Chr1 33133375 33135355 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2348 35 125 Miscellaneous Gene Families AT4G15700 34.066 6.01e-11 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2348 K03676 - gmx:100305955 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2348 1 33133375 33135355 Apr1g2348 1 33133375 33135355 ECH