Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2346 ATGGCTCAGCCTGTGGTGACCTTCATAGTGCAAAGTATTGGTGATTTGCTCATTCAAGAAGGACTGTTCTTATATGGGGTGGAAGACAAAGTGTTGCAGCTGAGAACTGAATTGAGGAGGATGCAGTCTTACTTGCAAGATGCAGATAGAAGGCAAGAAGAAAATGAAAGCCTCAGGAATTGGATTTCAGAAATCAGAGAGGCTGCTTATGATTCTGATGATGTTATTGAGGCACATGCCCTCAGAGGAGCCTCAAGAAGAAATATGATGGATGGTGTATTGAACCTCATCAAAAGGTATGCTTTGATCATCCACAGGCTCATAGAAATCCACCAAGTGGGATCTCAGGTTGATGATATCATAGCTAGGATTTCTAGCCTCACAGTTTGTCTGCAAACTTATGGTATAAAACCTGAGATAGGAGAAGCCCCAAATTCTGTGCATGGGCGGCAAAGAGCATTGAGGAGGTCTTACTCTCATATTATTGAAGAGGACATAATTGGTGTGGAAGATGATGTCAAGATTTTGCAGTCATGTTTGCTCAACCCCAACAAAGGCTATAGAGTAGTAGCCATTTGTGGAATGGGGGGTTTAGGGAAAACAACATTGGCTAAAAAGGTATATCATAGTACTAATGTGAGGCACCATTTTGAGGGCTTGGCTTGGGCTTACATATCACAACATTGCCAAGCAAGGGATGTGTGGGAAGGGATTTTGTTTAAGCTGATCTCTCCTTCCAAAGAGCTAAGAGAGGAACTAGTCAACATGAGAGATGAGGAGATTGCAAGCATGCTTTACCAAGTTCAAGTGGAGAAGAGTTGCTTAGTAGTCCTTGATGATATTTGGAGTGCAGATACTTGGAACAAACTGAGTCCTGCATTCCCACATGGGAGATCCCTATCAGTAATGGGTAGCAAAATATTGCTCACTACTAGAAATATTGATGTTGCATTACAAATGGATCCCAGTTGTTATCTTCATACACCAAGATGTTTGAATGAAGATGACAGCTGGGAATTGTTCCAAAAGAAAGCATTTACAAAAGTTGATGATCCAGACTTCAGAACAAGCACAGAGATGGAGAAGCTAGGGAGGGAAATGGTTGGAAGATGTGGAGGTTTACCATTGGCCATCATTGTGCTTGGAGGACTGTTAGCTTCAAAGCCTACATTCTATGAATGGGACACAGTGCGTCAGAACATCAATGCATATTTGAGGAGAGCAAAAGGCCAAGAACAACGCTTAGGAGTGTCTGAGGTGCTAGCTTTGAGCTATTATGAATTGCCATACCAATTGAAGCCATGCTTCTTGCACTTAGCCCATTTCCCAGAAAATCTAGAGATACCAACAAAGAAATTAATAAGAATATGGGTGGCTGAGGGTATTATATCATTGGTTCAGGATGAAGGGGAAGGCGAGGAAGCTCTTGAGGATGTGGCACAACGGTACTTGACTGAGCTAGTGGAGAGGTGTATGATTCAAGTGGTAGAAAAGAGCTCAACCGGAAGAATAAGAACTTGCCAAATGCACAACCTCATGAGGGACCTGTGTGTTTCTAAGGCATATCAGGAGAACTTTCTTGAGGTGTTTAATTCATGGAATGTAGTTGAAACTAGAGGGGCATCAAGAGCAATGCCAACAGGGAAAGTTCGTAGGCTTGCCTTATATCTTGATCAAGATGTTGATAGGTTCTTCCCTTCACACTTGAAAAGCCACCGCCATCTAAGGTCTCTACTTTGCTACCATGAAAAAACAGCTAGGCTAAGTGAATGGGGGTTGATGAAGCCAGTTTTCAACAAATGTAGGTTACTTAGAGTCTTGAACTTGGAGGGAATACAGGGTCAGAGAGGGAAGTTACCAAAAGAAATTGGCTACTTGATTCACCTAAGGTTTCTCAGTCTTCGAAATACAAAAGTTGATGAGTTGCCCCCATCAATAGGCAATTTGAAGTGCTTGCAGACCCTGGATCTTCTCACTGGGAATTCAACTGTTCAAATACCAAATGTGATAGGGAACATGCACAAATTAAGACATTTGTATCTACCAGAGTCTTGTGGTGATAGCACTGAAAGATGGAAACTTGACAGCCTGAAAAACTTGCAGACCTTGGTTAACTTCCCTTCTGAGAAGTGTGGGGTAAGAGACCTCATGAAATTAACCAATTTAAGAAAATTGGTGATAGATGATCCTAAATTTGGAGATATCTTCAGGTCTCCTAATGTGACATTCAGCCACCTAGCATCATTGTTTTTTGTTTGCTCTGAGGATATATCAACTGTCCATGTTGTAGTAGGATGTCCCAATCTTTACAAACTGCACATAGAGGGGCCTATAAAGAATTTTCCTGAACACCACCAAATTTCTTCCAAGCTAGCCAAGCTAAAGTTGCAAGGTTCTGAACTTCTTGTAGATCCAATGCCAACATTAGAGAAGCTACCCAATTTAAGGTTGCTTGAGTTAGAACTTGATTCATTCATGGGAAAGCAACTAGTTTGTTCTAGCAAAGGTTTCCCTCAGCTTAAGTCTCTTCTTATCTATGACTTGCCCAATCTTGAAGAATGGAAGTTGGATAAAGGAGCCATGCCTAGTCTTAGCAAACTTGAGATTTCAAATTGCACTAAGCTTGACAAGGTTCCAGATGGACTCAGGTTTATCACCACTCTTCAGGATTTTGAGATCAGATCAATGTTTGCAGCATTCAGAACAAGACTTGAAAAAGGAGGAGAGGATCATTACAAAGTCCAACATGTGCCATCCATGGTGTTTTCTTATTGTGACTATTAG 2784 0.4149 MAQPVVTFIVQSIGDLLIQEGLFLYGVEDKVLQLRTELRRMQSYLQDADRRQEENESLRNWISEIREAAYDSDDVIEAHALRGASRRNMMDGVLNLIKRYALIIHRLIEIHQVGSQVDDIIARISSLTVCLQTYGIKPEIGEAPNSVHGRQRALRRSYSHIIEEDIIGVEDDVKILQSCLLNPNKGYRVVAICGMGGLGKTTLAKKVYHSTNVRHHFEGLAWAYISQHCQARDVWEGILFKLISPSKELREELVNMRDEEIASMLYQVQVEKSCLVVLDDIWSADTWNKLSPAFPHGRSLSVMGSKILLTTRNIDVALQMDPSCYLHTPRCLNEDDSWELFQKKAFTKVDDPDFRTSTEMEKLGREMVGRCGGLPLAIIVLGGLLASKPTFYEWDTVRQNINAYLRRAKGQEQRLGVSEVLALSYYELPYQLKPCFLHLAHFPENLEIPTKKLIRIWVAEGIISLVQDEGEGEEALEDVAQRYLTELVERCMIQVVEKSSTGRIRTCQMHNLMRDLCVSKAYQENFLEVFNSWNVVETRGASRAMPTGKVRRLALYLDQDVDRFFPSHLKSHRHLRSLLCYHEKTARLSEWGLMKPVFNKCRLLRVLNLEGIQGQRGKLPKEIGYLIHLRFLSLRNTKVDELPPSIGNLKCLQTLDLLTGNSTVQIPNVIGNMHKLRHLYLPESCGDSTERWKLDSLKNLQTLVNFPSEKCGVRDLMKLTNLRKLVIDDPKFGDIFRSPNVTFSHLASLFFVCSEDISTVHVVVGCPNLYKLHIEGPIKNFPEHHQISSKLAKLKLQGSELLVDPMPTLEKLPNLRLLELELDSFMGKQLVCSSKGFPQLKSLLIYDLPNLEEWKLDKGAMPSLSKLEISNCTKLDKVPDGLRFITTLQDFEIRSMFAAFRTRLEKGGEDHYKVQHVPSMVFSYCDY* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2346 927 Gene3D - 331 423 IPR042197 -
Apr1g2346 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 439 IPR027417 -
Apr1g2346 927 Pfam Rx N-terminal domain 5 87 IPR041118 -
Apr1g2346 927 Gene3D - 155 325 IPR027417 -
Apr1g2346 927 PANTHER DISEASE RESISTANCE RPP8-LIKE PROTEIN 3-RELATED 27 896 - -
Apr1g2346 927 Gene3D Ribonuclease Inhibitor 541 906 IPR032675 -
Apr1g2346 927 CDD RX-CC_like 2 128 IPR038005 -
Apr1g2346 927 Gene3D - 424 521 IPR036388 -
Apr1g2346 927 Gene3D - 5 114 - -
Apr1g2346 927 SUPERFAMILY L domain-like 508 895 - -
Apr1g2346 927 Pfam NB-ARC domain 170 425 IPR002182 GO:0043531
Apr1g2346 927 PRINTS Disease resistance protein signature 189 204 - -
Apr1g2346 927 PRINTS Disease resistance protein signature 268 282 - -
Apr1g2346 927 PRINTS Disease resistance protein signature 371 385 - -
Apr1g2346 927 PRINTS Disease resistance protein signature 859 875 - -
Apr1g2346 927 PANTHER DISEASE RESISTANCE PROTEIN RP 27 896 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2346 Apr-Chr1 33120047 33124165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2346 559 704 Receptor kinase-like Gene Family AT5G56040 31.973 6.16e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2346 - - gmx:100305356 1459.51