Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2315 ATGGGAGGGTGCTTTTCTTCTAAACCATCCTCCACATTCAACAATGTACGTTTGGTTCATCTTAGTGGTTATGTAGAGGATTTTGTGGAACCAATTTCAGTGAGCGAAGTCACAGGCAACACCTCGAAGCACTTTGTTTGCACGTCAGTTCAGCTTCTTTCCTCTTGCTCAAAACCATTGAATGGAGATACCCAACTCCAACCTGGAATTGTGTACTTCATGCTACCATACTCAATATTGCAAGCTGATGTTTCTCCTGTGGACTTGGCTTCCCTTGCAAAAAGGCTCACTACAATAGCCAAAACTAGCAAATGTGAAGACAAAAGGTCCTCACAGAAAGCTAATCCTTTGTTAAGTCAACTTGGGATGAGCAGTGTTTATAGTTCACCTTCCAGCAGTCCTGGCAGACTTGGCATGGTGGAGCAAATCGGTATGCCATATGGCGGACGCAGCCCGTGTAGAATGCAGCCATGGAAACCTATCTTGGACACTATCAGAGAGAAATCATTCAATAGAAGAAGTGAATCAGATTTGCAAGAAATTTATTGA 549 0.4317 MGGCFSSKPSSTFNNVRLVHLSGYVEDFVEPISVSEVTGNTSKHFVCTSVQLLSSCSKPLNGDTQLQPGIVYFMLPYSILQADVSPVDLASLAKRLTTIAKTSKCEDKRSSQKANPLLSQLGMSSVYSSPSSSPGRLGMVEQIGMPYGGRSPCRMQPWKPILDTIREKSFNRRSESDLQEIY* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2315 182 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 178 - -
Apr1g2315 182 Pfam PADRE domain 1 167 IPR025322 -
Apr1g2315 182 PANTHER OS06G0700300 PROTEIN 1 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2315 Apr-Chr1 32767981 32769146 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2315 - - gmx:100810460 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2315 1 32767981 32769146 Apr1g2315 1 32767981 32769146 ECH
Apr9g2563 9 32811475 32811970 Apr1g2315 1 32767981 32769146 PCT