Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2306 ATGAGGACGCCAAAACCTGCTACTCCTTCCGAGTCTAACTTGAAAAGGAAAAGAAAAGAAGGTAAAGTTGAGATAAAAAAGAAAGAAGGTAAAAGGGAGGAAAAGAGGAAAATTGCCAATGTCCTTAAATCTTGTAGCATACTGGAGGATGACCATAATGAAGAGCAAGGGTTTGACATTGAATCTCCTAGAAACAAAGTTGTGGAAAGTATGTGGCAAGATCCTGATGACAATGATTCTGGATTAACAGAAGGTTCTGAAACTGAAGAAGATGTTGAGATTCATTCAGATGAAGAGGATGTTGGAACTAATGGTCAGTCAACTTCTGAGGATTCAGTGCATTTGAGCTCTTTTGATTTACATTTGCAACATAATTTGTCAAAAGAAGAAATTAACAGCCAAAGCAACAGGAAATTCAGCTGGGAGACTCCAGCTACTGGTATGTCAAATTGCAAATGGACAGGAACTGGAGAGAATATTTTGGAGGGTTTGAATATCAATACTTGTGACATTCTGAAAGCAAAGTTACATGAGCACTGGATGGATGTCTACAAGACATCTGGAGGCAAGGATATTAATTCACCTAAACAGAAGATATTTTTCTCCCTTTGCAGCAGCTACCGTGATATACTTTGCTGTAACAAAAGGCCTTTCTACCTCAAAGGCCTTGAAGACACAGGCATCATGGATGCATACTTAATGCATTCTCTCAATCATGTCTTCAGAACCAGAGACTGTGTGAAAAAAAATGATGCCAAACTGACCAGGCTTGAAGAGGTTGCTGATGTTGATAGATTTCGAGATCAGGGTTTTACTCGTCCTAAGGTTTTGATTTTATTGCCATTGGCAAGTATTGTGTACCGTGTTGTAAAGAGGCTTGTACAGCTTACACCTTCAGCTTACAAAGTGAGTGTTGAACATATGGATCGCTTTTCTGCTAAATTTGGAAGTGAAGAACATAAAGACGATACAGAAAATGGCCAAGAATCTGAAAATGCAAAACATAGGTCTTCCAAAGCAACTGACTTTCAAATGCTTTTTGGTGGCAATAATGAAGATGACTTTATGATTGGCATAAAATTTACGAGGAAAACAATCAAGTTGTTCAGTGATTTCCATACGTCAGACATTATTGTTGCTTCAGCACTTTCCTTGGTCAATAAAATTGAGGAGGCTGGGAGTAATAAGGAAAAAGATGTAGATTTTCTTTCTTCGATAGAGGTTCTGATTATTGATCATGCAGATGTAATTGCAATGCAGAACTGGTCTCATGTGCATACAGTTATTGAACATTTGAACCGCTTACCATCTAAGCAGCCAGGAACAGATGTAATGCGCATTAGACCATGGTATCTTGATGATCATGCCAGGTTTTACAGGCAAACAATAATACTGGGTTTTTATTCAAATCCAGATATAAATGCTTCATTCAATCATCAGTGTTTAAATTATGAAGGGAAGGTGAAACTGCTCTGTGAATATAAAGGTGTCTTGCACAAAGTGCTACCTGAAATACGACAAATTTATGAACGATTTATTGTAGACTCAATTGTAGAAGCTGATGATGCCCGTTTTGATTATTTTGTTAAGAAGGTCTTCCCTAGAATAAAAGATTCAGATCAGGGAGGGATCATGTTATTTATGAATTCTTACTTTGAATTTATTCGAATTCGAAATTTTTTGAAGTCACAGAATGCCTCCTTTTGTCTGCTTGGGGAGTATACGACCCAAAGTGATATATCTCGCTCGCGTCTTTGGTTCTATGAAGGAAAAAGAAAAATTATGCTTTACACTGAGAGATCTCATTTTTACCACAGATATAAGATTCGTGGGGTTCAGAATTTGATCGTTTATTCACTCCCAGAGAGGAAGGAATTTTACCCTGAGATTGTGAATATGCTTGATGGGTCTGACAATATGACATGCACTGTCCTTTTTTCCAGCCTTGACAAGCTTCGGCTGGAAAGAATTGTTGGAACTACTCCAGCCAAAAGGATGGTAGCTGCGGAGAAAGGTGTTTTTGTTTTCTGCCATTAG 2037 0.38 MRTPKPATPSESNLKRKRKEGKVEIKKKEGKREEKRKIANVLKSCSILEDDHNEEQGFDIESPRNKVVESMWQDPDDNDSGLTEGSETEEDVEIHSDEEDVGTNGQSTSEDSVHLSSFDLHLQHNLSKEEINSQSNRKFSWETPATGMSNCKWTGTGENILEGLNINTCDILKAKLHEHWMDVYKTSGGKDINSPKQKIFFSLCSSYRDILCCNKRPFYLKGLEDTGIMDAYLMHSLNHVFRTRDCVKKNDAKLTRLEEVADVDRFRDQGFTRPKVLILLPLASIVYRVVKRLVQLTPSAYKVSVEHMDRFSAKFGSEEHKDDTENGQESENAKHRSSKATDFQMLFGGNNEDDFMIGIKFTRKTIKLFSDFHTSDIIVASALSLVNKIEEAGSNKEKDVDFLSSIEVLIIDHADVIAMQNWSHVHTVIEHLNRLPSKQPGTDVMRIRPWYLDDHARFYRQTIILGFYSNPDINASFNHQCLNYEGKVKLLCEYKGVLHKVLPEIRQIYERFIVDSIVEADDARFDYFVKKVFPRIKDSDQGGIMLFMNSYFEFIRIRNFLKSQNASFCLLGEYTTQSDISRSRLWFYEGKRKIMLYTERSHFYHRYKIRGVQNLIVYSLPERKEFYPEIVNMLDGSDNMTCTVLFSSLDKLRLERIVGTTPAKRMVAAEKGVFVFCH* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2306 678 MobiDBLite consensus disorder prediction 1 35 - -
Apr1g2306 678 MobiDBLite consensus disorder prediction 11 35 - -
Apr1g2306 678 MobiDBLite consensus disorder prediction 80 97 - -
Apr1g2306 678 Gene3D - 231 447 IPR027417 -
Apr1g2306 678 Pfam Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 195 676 IPR010678 GO:0005730|GO:0006364|GO:0034511
Apr1g2306 678 PANTHER ORF PROTEIN-RELATED 9 677 IPR010678 GO:0005730|GO:0006364|GO:0034511
Apr1g2306 678 MobiDBLite consensus disorder prediction 47 62 - -
Apr1g2306 678 MobiDBLite consensus disorder prediction 47 112 - -
Apr1g2306 678 MobiDBLite consensus disorder prediction 315 338 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2306 K14774 - gmx:100810500 1169.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2306 1 32601096 32618325 Apr1g2306 1 32601096 32618325 ECH