Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2288 ATGCAAATGCAAGTGTCCTCAGTGTCTTTACAAGCCAAGGTTGGGGTTTGTGTGAAGTCACAACAGCACACGAACCCAGCAACCATAAACGACCACAGTTCCTCGGCCAAGGTGTATGCTCCTAAGTGGACCCAGAAGACAATAACTTTGCCTCCCCATAAACGTGGCTGTCATCTCATCACTTCTAAGATAGTGAAAGAAATTGGGCAAGAATTGTCTGGATTCAAGTGTGGCCTAGCCCATCTGTTCTTGCATCACACAAGTGCTTCTCTGACCATCAATGAGAATTGTGACTATGATGTTCGAGATGACACAGAAACGTTCCTCAATCGGATAGTTCCTGAGGGGCCGTCTGCACCTTGGAAGCATACTATCGAAGGATACCGATTACAAATGGAAAATTTAACATGGGGACATGGCAGGGTATATGGCTGTGTGAGCATCGGGATTATCCTACATCGCGTACAGTTGTCGTCACTCTTAATGGAATATGAAATGCTCAGAGGTCTATTTGCTTAA 519 0.4528 MQMQVSSVSLQAKVGVCVKSQQHTNPATINDHSSSAKVYAPKWTQKTITLPPHKRGCHLITSKIVKEIGQELSGFKCGLAHLFLHHTSASLTINENCDYDVRDDTETFLNRIVPEGPSAPWKHTIEGYRLQMENLTWGHGRVYGCVSIGIILHRVQLSSLLMEYEMLRGLFA* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2288 172 PANTHER - 16 127 - -
Apr1g2288 172 PANTHER UNCHARACTERIZED PROTEIN YJBQ-RELATED 16 127 IPR001602 -
Apr1g2288 172 Gene3D - 29 141 IPR035917 -
Apr1g2288 172 Pfam Uncharacterised protein family UPF0047 60 127 IPR001602 -
Apr1g2288 172 SUPERFAMILY YjbQ-like 43 126 IPR035917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2288 Apr-Chr1 32410618 32415752 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2288 - - pvu:PHAVU_009G240200g 212.616