Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2286 ATGACAATGCAAGTCTCAAGTAAAAAGTTTGAACGAACTCCAAGTATTCAGAAGGTATTTCCACCCAAAAATAATGGCGAAATCACTGGATGTGACACATGCTCTGTTCAGTTCATCAACCATCAATGTAATCCATCAGAAAGCCAAATCTGTCAATGCTACGGTTCAAAACCACTTCTGTTAGAAGATGTGGCCCCTTCCCCAATAAATCTCTCATCTTCTATTCCAGCCCATGCGATGGAACGTGCTGTGTCAATATATCAACTGGTTCCTCCGTCAAGTACTTCTGCAATTCCACCTCTTCACGCAGGTGATCAATTGGATCTTGAACACATTAACTTTTCAGGACCCCGCTCGAGTTCATTTCCTGTTTTTGGAGATAAAATACCAGCAAATCTTCACCTGTACTTGCCCTTATATAGAGCTGCAATGAGAGGTGATTGGGACAAGGCTAATGTGTTCCTAAATTTGCATCCTGGCGCAGAGCGTGCCAGGATTTCAAGAGGGTGGGAAACAGCTCTTCATATTTCTGCTGGTGCTAAACACATCAAATTTGTGGAGGAACTGATCAAAAGAATGCGAAGTAAGGACTTGGAAATTCAAGACAAAGATAACAATACTGCACTTTGTTTTGCTGCAATATCAGGGGTTACCAAGATAGCAAAGCTGATGGTGGAAAAGAATAGAAACTTACCTGGAATACGAGGTAGTGAAGGGGTGACACCACTTTATATAGCTACATTACTGGGTCAAAAGGACATGGTTTGGTATCTCTATTCAGTGACCAATCATGAGGATCTAAATACAGAAGACTACTTTAGCCTATTAATTGCTGCTATATCTACAGATTTATATGATTTTGCCTTACATATACTTGAGCGTCAACCACTATTAGCAACTTATCATGGTTTGAATGGGGAGACAGCCCTGCACGTGTTGGCAAGAAAACCGTCATCATTTACCAGTGGCATTCAACTAGGAATATGGGAAAGATGCATCTATCCATGGATTCAAGTCAAACTAACAAAAGATTACAGATGCCAGGCTAGCAACTTCCAATCCCAGGTGCCTTCAACCTTTCAAGGTGCAGATAATCTATTGTTGACTGGACTTTGGTGGGCTGTCAAATATCTTGTGCCAGGATTTGAAGCAGTTCAGAAGAAAAGAATATTGAATTCACAGGCTTTAGAGTTAGTTCAACGTCTTTGGAAAGAAATAGTGTCTTCAAAAGAAATACAGCAAGGAGACTTAATTAGAAGCCCTTTGTCACGACCCCTATTTATTGCTGCTGAATTTGGAATCCCTGAGATTGTAAATGAGCTTCTTGAGTCATATCCAGATCTACGTAAGAAAGTTGACAGCCAAAAAAGAAGCCTTTTCCACATTGCAGTGATGTATCGTCAGGAAAAAGTATTTAAACTGATTTATGACATAGGGGCACAAAAGGATCTGATAACTTCCTACAGAGACAATAACAATCACAACATATTGCATTTAGCTGGAAAATTGGCCCCTTCAGATCAACTTCATGTTGTATCCGGTGCAGCACTGCAGATGCAAAGGGAATTATTGTGGTTCAAGGAGGTGGAAAAGATCATACAGCCTCTTTTCAAGGAGATTAATGATTCCAAAGGTAAGACACCTCAAATGTTATTTACTGAGGAACACAAAGGGTTGGCCAAAGAAGGAGAAAAGTGGCTGAAGAACACTGCTTCATCATGCATGCTAGTTGCAACACTCATTACCACTGTGATGTTTGCAGCTATCTTTACTGTTCCAGGTGGGAACAACAATAATAATGGGTATCCTATTTTAATGCATACTGTACCCTTCAAAGTTTTTGCTCTCTCAGATGCTCTTGCATTGTTCTCCTCGGTAATATCGGCGCTGATGTTTTTGTCCATACTCACCTCAAGATATGCACAGGAGGATTTCCTTGTGTCACTGCCTAAAAGGTTGAGTGTTGGCATTGCAACCCTTTTCTTCTCCATCATTACAATGCTCATAGCTTTTGGTGCAACATTTTTCATTGTACTTGGCCATCAATTGGCATGGATTGTCATTCCAATTACCTTTGTTGCTTGTATACCAGCAACATTGTTTGCCTTTTTACAGTTTCCTCTTCTTGTTGATACAATCTCGTGTACATATGGACCTGGCTTATTTGCTCATTGA 2175 0.4037 MTMQVSSKKFERTPSIQKVFPPKNNGEITGCDTCSVQFINHQCNPSESQICQCYGSKPLLLEDVAPSPINLSSSIPAHAMERAVSIYQLVPPSSTSAIPPLHAGDQLDLEHINFSGPRSSSFPVFGDKIPANLHLYLPLYRAAMRGDWDKANVFLNLHPGAERARISRGWETALHISAGAKHIKFVEELIKRMRSKDLEIQDKDNNTALCFAAISGVTKIAKLMVEKNRNLPGIRGSEGVTPLYIATLLGQKDMVWYLYSVTNHEDLNTEDYFSLLIAAISTDLYDFALHILERQPLLATYHGLNGETALHVLARKPSSFTSGIQLGIWERCIYPWIQVKLTKDYRCQASNFQSQVPSTFQGADNLLLTGLWWAVKYLVPGFEAVQKKRILNSQALELVQRLWKEIVSSKEIQQGDLIRSPLSRPLFIAAEFGIPEIVNELLESYPDLRKKVDSQKRSLFHIAVMYRQEKVFKLIYDIGAQKDLITSYRDNNNHNILHLAGKLAPSDQLHVVSGAALQMQRELLWFKEVEKIIQPLFKEINDSKGKTPQMLFTEEHKGLAKEGEKWLKNTASSCMLVATLITTVMFAAIFTVPGGNNNNNGYPILMHTVPFKVFALSDALALFSSVISALMFLSILTSRYAQEDFLVSLPKRLSVGIATLFFSIITMLIAFGATFFIVLGHQLAWIVIPITFVACIPATLFAFLQFPLLVDTISCTYGPGLFAH* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2286 724 Pfam Ankyrin repeats (3 copies) 204 268 IPR002110 GO:0005515
Apr1g2286 724 PANTHER PROTEIN ACCELERATED CELL DEATH 6-LIKE 154 718 - -
Apr1g2286 724 Coils Coil 186 206 - -
Apr1g2286 724 Gene3D - 389 524 IPR036770 -
Apr1g2286 724 PANTHER CASKIN 154 718 - -
Apr1g2286 724 SUPERFAMILY Ankyrin repeat 138 501 IPR036770 -
Apr1g2286 724 Pfam Domain of unknown function 564 677 IPR026961 -
Apr1g2286 724 Gene3D - 131 322 IPR036770 -
Apr1g2286 724 SMART ANK_2a 455 484 IPR002110 GO:0005515
Apr1g2286 724 SMART ANK_2a 204 233 IPR002110 GO:0005515
Apr1g2286 724 SMART ANK_2a 134 163 IPR002110 GO:0005515
Apr1g2286 724 SMART ANK_2a 421 450 IPR002110 GO:0005515
Apr1g2286 724 SMART ANK_2a 169 198 IPR002110 GO:0005515
Apr1g2286 724 SMART ANK_2a 238 269 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2286 Apr-Chr1 32401440 32405606 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2286 401 696 Miscellaneous Gene Families AT3G12360 25.513 1.31e-18 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2286 - - gsj:114366966 1193.33