Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2243 ATGGGTAGCTACGAGGCGGTGACGGAGAAGCAAGGAACGACCAAGTGGGTGGTGACGTGCATGGTTGGAGGGGTGATGGTGGGTGTATCACTGTTGGGTCTATATTCTGGCCACCTTGGAATGTTCTGGAAGACCAGAAGACGCAACAAGAAACCAATTCGTGTCTACATGGATGGTTGCTTTGACATGATGCATTATGGCCATTGCAATGCCCTTCGTCAAGCTCGTGCCCTCGGTGACCAACTCATTGTTGGTGTTGTTAGTGATTCTGAGATCACTGCTAATAAGGGTCCTCCTGTTACCCCTCTTCACGAAAGGTTGATAATGGTGAATGCTGTGAAGTGGGTTGATGAGGTTATTCCTGAAGCTCCTTATGCTATAACTGAGGAGTTCATGAAGAAGCTTTTTGATGAGTATAAGATTGATTACATTATTCATGGGGATGATCCTTGTGTTCTTCCTGATGGAACTGATGCTTATGCTCATGCTAAAAAGGCTGGTCGCTATAAACAGATAAAGCGTACTGAAGGAGTTTCCAGCACTGATATTGTTGGTCGAATGCTTCTCTGTGTAAGAGAAAGGTCTGTTAGTGACAGTCATAATCATTCTTCTTTACAAAGACAGTTCAGCAATGGCCATAGTCCAAAGTTTGAAGCTGGTGTACCTGCAATTGGAACTCGTATATCTCATTTTCTGCCTACATCTCGTAGAATTGTTCAGTTCTCAAATGGGAGGGGTCCAGGACCTGATGCCCGCATTGTATATATAGATGGTGCTTTTGATCTCTTTCATGCTGGACATGTGGAGATCTTGAGACTTGCTAGAGATCTTGGAGATTTCCTGCTCGTTGGAATACACACAGATCAGTCAGTCAGTTCTACTAGAGGATCACATCGTCCTATCATGAATCTTCATGAAAGAAGTCTAAGTGTTTTAGCATGTCGCTATGTGGATGAGGTTATAATTGGTGCACCATGGGAGGTGTCCAAGGATATGATCACGACGTTTAACATCTCATTAGTTGTTCATGGAACCATTGCAGAAAATAATGATTTTCAGAAGGAACAATGCAATCCATATGCTGTACCTATTAGCATGGGCATCTTCAAAATTTTAGAAAGTCCTTTAGATATAACAACTACTACAATAATTAGGAGGATTGTATCAAACCATGAGGCATACCAGAAACGTAATGAGAAGAAGGGGGAGAGTGAGAAAAGATACTACGAGGATGTTGAGAGGAAGCAGTTACATTAG 1257 0.4256 MGSYEAVTEKQGTTKWVVTCMVGGVMVGVSLLGLYSGHLGMFWKTRRRNKKPIRVYMDGCFDMMHYGHCNALRQARALGDQLIVGVVSDSEITANKGPPVTPLHERLIMVNAVKWVDEVIPEAPYAITEEFMKKLFDEYKIDYIIHGDDPCVLPDGTDAYAHAKKAGRYKQIKRTEGVSSTDIVGRMLLCVRERSVSDSHNHSSLQRQFSNGHSPKFEAGVPAIGTRISHFLPTSRRIVQFSNGRGPGPDARIVYIDGAFDLFHAGHVEILRLARDLGDFLLVGIHTDQSVSSTRGSHRPIMNLHERSLSVLACRYVDEVIIGAPWEVSKDMITTFNISLVVHGTIAENNDFQKEQCNPYAVPISMGIFKILESPLDITTTTIIRRIVSNHEAYQKRNEKKGESEKRYYEDVERKQLH* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2243 418 PANTHER - 16 411 - -
Apr1g2243 418 Pfam Cytidylyltransferase-like 255 350 IPR004821 GO:0003824|GO:0009058
Apr1g2243 418 Pfam Cytidylyltransferase-like 56 184 IPR004821 GO:0003824|GO:0009058
Apr1g2243 418 SUPERFAMILY Nucleotidylyl transferase 54 187 - -
Apr1g2243 418 CDD ECT 250 402 - -
Apr1g2243 418 TIGRFAM cyt_tran_rel: cytidyltransferase-like domain 253 320 IPR004821 GO:0003824|GO:0009058
Apr1g2243 418 TIGRFAM cyt_tran_rel: cytidyltransferase-like domain 54 119 IPR004821 GO:0003824|GO:0009058
Apr1g2243 418 PANTHER ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE 16 411 IPR044608 GO:0004306|GO:0006646
Apr1g2243 418 SUPERFAMILY Nucleotidylyl transferase 252 387 - -
Apr1g2243 418 MobiDBLite consensus disorder prediction 394 418 - -
Apr1g2243 418 CDD CCT 51 201 IPR041723 -
Apr1g2243 418 Gene3D HUPs 225 417 IPR014729 -
Apr1g2243 418 Gene3D HUPs 41 220 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2243 Apr-Chr1 31877399 31893727 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2243 15 410 Acyl Lipid Metabolism Gene Families AT2G38670 78.922 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2243 K00967 - gmx:100775240 726.087