Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2204 ATGGGGAACATGCAGAGAGACAACCAATTCAATAGCGTAAAAGGAGCAATAAGTATCTTAAAAGAAGGGGAAGAAGGAACACTTATTACACCATTACTTTCTTCTTCCCAACATCCCTTTCTCTCTGCACATATACTAGAGAAACAAAAATCCACATTAGTCTCCAAAACTATGAGATTCTCAATCTTATCCTTTCTCTTATTGTTGGTGGTACAAGAAGCAACTTGCTTCAATCACCCCACACCAATGTCTCATTTCAGGAATAAACTTAAGGATAGAATGGTCATGGGTCTTTCCCAAGCACCCTCTCCATCTCCAGATACCAAAAGGGGAGGAAGAGTGGTGTATCCAAGTGAGTATGGTGCAGACCCTACAGGGGCAGAAGACAGCAGTGATGGCATTATGAAAGCAGTAGGAGAAGCATTTGGGATGGAGAGTGGGCTTGAGTTGCTGCCAGGAGTTAGAGACCTTGGAGGTGTTATTATTGATCTGCAAGGTGGCAACTACACAATCAGCAAACCCATCACATTCCCTTCCTCTGGTGGTGGCAATGTTGTGGTACAAGGAGGGAGCTTAAGAGCTTTGGATAAGTTCCCTACTGATAGGCATCTTATTGAGTTATGGGCAACAAATTCCCAAAAGCTTCCAAAAACAACAGATTTCAACAGCATTAAACTTCAACAAACAATTGGAATTTACTATGAAGACATAACCTTTAGAGACATCCTATTTGATTCAAGCTACAAGGGTGGAGGAATCTTCATTATTGGTTCTGCTAGAATCAGAATCAACAACTGTTTCTTCCTCCATTTCACCACAGAAGGAATTCTAGTACAAGGTGGGCATGAGACCTTCATATCAAGCAGTTTCCTTGGGCAACACTCAACAGTTGGTGGAGACAAAGGGGAGAGGAACTTCTCTGGCACTGCCATTGATCTTGCAAGCAATGATAATGCAATCACAGATATTGCAATTTTCTCTGCAGCCATTGGTGTTGTTCTAAGGGGTCAGGCCAATATGGTCACAGGAGTGCATTGTTATAACAAGGCCACAGGTTTTGGTGGCATAGGCATTTTGGTGAAGCTAGCAGGAAATTCACAAACTAGAATTGACAATTGTTACATGGATTATACAAGTATAGTCATGGAAGATCCGGTTCAAGTTCATGTCAGTAATGGGTTTTTCTTAGGAGATGCTAATGTTGTTTTGAAATCAATTAAAGGAAAAGTTTTTGGATTGAATATAGTTGATAATATGTTCAATGGGAACCCCAATAACAAAGTTCCAATTGTTGCTCTAGATGGGCAATTTAGTAACATTGATCAAGTGGTGACTGATAGGAACAATGTTATTGGTATGAGTTTGAGATCAACGATTGGGAGGTTAACTGTGGCAGGAAATGACACAAAGTGGGTGGCTGATTTTTCAAATGTTTTGCTATTCCCTAATCGGATTAGTAATTTCCAATATTCATTTTACTCACAAGGGGAGGTTAAGTTCTTGGCACATTCAGTGACCAATGTATCAAATAATGTTGTAGTTGTGGAAAGTGAGAAACCAGTTCAAGGGGTTGTTTCCTTCTTCGTTCAGCAGTGA 1596 0.4041 MGNMQRDNQFNSVKGAISILKEGEEGTLITPLLSSSQHPFLSAHILEKQKSTLVSKTMRFSILSFLLLLVVQEATCFNHPTPMSHFRNKLKDRMVMGLSQAPSPSPDTKRGGRVVYPSEYGADPTGAEDSSDGIMKAVGEAFGMESGLELLPGVRDLGGVIIDLQGGNYTISKPITFPSSGGGNVVVQGGSLRALDKFPTDRHLIELWATNSQKLPKTTDFNSIKLQQTIGIYYEDITFRDILFDSSYKGGGIFIIGSARIRINNCFFLHFTTEGILVQGGHETFISSSFLGQHSTVGGDKGERNFSGTAIDLASNDNAITDIAIFSAAIGVVLRGQANMVTGVHCYNKATGFGGIGILVKLAGNSQTRIDNCYMDYTSIVMEDPVQVHVSNGFFLGDANVVLKSIKGKVFGLNIVDNMFNGNPNNKVPIVALDGQFSNIDQVVTDRNNVIGMSLRSTIGRLTVAGNDTKWVADFSNVLLFPNRISNFQYSFYSQGEVKFLAHSVTNVSNNVVVVESEKPVQGVVSFFVQQ* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2204 531 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 58 531 - -
Apr1g2204 531 PANTHER POLYGALACTURONASE QRT3 58 531 IPR039279 GO:0004650
Apr1g2204 531 SUPERFAMILY Pectin lyase-like 132 488 IPR011050 -
Apr1g2204 531 Gene3D - 118 523 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2204 Apr-Chr1 31458984 31464040 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2204 - - gmx:100802482 769.615