Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2201 ATGATGCGCCGTCAGAACACAATCACCACAAATTCATATTCTCTATGGTTCTCTCCTTTTGAGATTGAGAAGCATTGCTCTTCTGCGTTAGCTTTTCCTTTTCCTTCTGCTTCTCCTCACAGCCTCAGCCACATCCACAGCCACAGCCACACACTCACCACCCTCCCTCTCTCACTATGCCTTTCATCACTTTCTTCTTCATCTTTTTCTTCTTCTGCTGCCTCTCAGCTCCTTCTTCTGTTTCCATGTTTTCTGATTCTGAGAGATGAGGCAGTAGGAAGGCTTATTGAGCTTGGGAAGGTGAGTGATGCAAGTGGTTATCTTGAGAGGACATTCTTGAGTCCTGCATCCATGAGGGCAATTAATCTTATTCGTAAATGGATGGAGGATGCTGGTTTGAGAACTTGGGTGGACCAAATGGGAAACGTACATGGTCGAGTCGATGGTGCAAATGCAAATGCTGAAGCGTTGTTGATTGGCTCTCACATGGACACTGTTGTTGATGCTGGGATGTTTGATGGATCACTAGGAATTGTCTCTGCCATATCAGCTTTGAAGGTTATGCATGTCAATGGAAAATTGCAAAAGCTAAGGCGCCCGGTTGAGGTTATTGCATTTAGTGATGAAGAGGGTGTCAGATTTCAAACTACTTTCTTGGGCAGTGGTGCTGTTGCTGGTATTTTACCTGCTACAACATTGGAGATATCTGATAAGAGGGATGTAATGATAAAAGATTTTCTTAAGGAGAACTCAATAGAAATTACAGAGGAAAGTCTTTTACAGCTCAAGTATGACCCAAAATCTGTTTGGGGTTATGTTGAGGTTCACATTGAGCAGGGTCCTGTGCTAGAACAAGTTGGTTTCCCACTTGGTGTGGTTAAAGGCATAGCTGGGCAGACACGATTGAAGGTTACAGTTAGGGGCTCACAAGGTCATGCTGGAACTGTTCCAATGTCCATGCGTCAAGATCCTATGGCTGCTGCTGCTGAACAAATTGTGGTCTTGGAAAGCCTCTGCAAAAATCCTCAAGAATTCCTTTCTTATGATGGTCATTGCAGTGATTCATCAGTGAAATCACTTTCAAGCTCGCTTGTTTGTACTGTTGGAGAGATATCAACATGGCCAAGTGCCAGTAATGTCATTCCTGGCCAGGTTACATATACCGTGGATATACGAGCGATTGATGACCTTGGACGCGAGGCTGTTATCTATGATTTATCCAAGCGGATTTATCAAATATGTGACAAGCGTTCAGTTTCCTGCATTGTGGAACACAAGCACGATGCAGGTGCTGTGATTTGTGATTCTGATCTGAGTTCACAGCTCAAGTCAGCGGCTTATTCTGCACTCAAGAGGATGGAGGGTGACATTCAGGATGAAGTGCCAACCTTAATGAGTGGAGCAGGCCATGATGCAATGGCAATATCTCACTTAACAAAGGTGGGAATGCTGTTTGTGCGCTGTCGCGGAGGCATAAGTCACTCTCCACAAGAACACGTGCTAGATAATGATGTTTTGGCAGCTGGTTTAGCAACCTTGTCATTTCTAGAAAATCTATAA 1560 0.4423 MMRRQNTITTNSYSLWFSPFEIEKHCSSALAFPFPSASPHSLSHIHSHSHTLTTLPLSLCLSSLSSSSFSSSAASQLLLLFPCFLILRDEAVGRLIELGKVSDASGYLERTFLSPASMRAINLIRKWMEDAGLRTWVDQMGNVHGRVDGANANAEALLIGSHMDTVVDAGMFDGSLGIVSAISALKVMHVNGKLQKLRRPVEVIAFSDEEGVRFQTTFLGSGAVAGILPATTLEISDKRDVMIKDFLKENSIEITEESLLQLKYDPKSVWGYVEVHIEQGPVLEQVGFPLGVVKGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMAAAAEQIVVLESLCKNPQEFLSYDGHCSDSSVKSLSSSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSKRIYQICDKRSVSCIVEHKHDAGAVICDSDLSSQLKSAAYSALKRMEGDIQDEVPTLMSGAGHDAMAISHLTKVGMLFVRCRGGISHSPQEHVLDNDVLAAGLATLSFLENL* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2201 519 SUPERFAMILY Bacterial exopeptidase dimerisation domain 298 429 IPR036264 -
Apr1g2201 519 TIGRFAM hydantase: amidase, hydantoinase/carbamoylase family 94 343 IPR010158 GO:0016813
Apr1g2201 519 Pfam Peptidase family M20/M25/M40 158 508 IPR002933 GO:0016787
Apr1g2201 519 CDD M20_bAS 94 513 - -
Apr1g2201 519 Gene3D - 298 430 - -
Apr1g2201 519 PANTHER ALLANTOATE DEIMINASE-RELATED 86 513 - -
Apr1g2201 519 Pfam Peptidase dimerisation domain 298 410 IPR011650 -
Apr1g2201 519 Gene3D Zn peptidases 102 509 - -
Apr1g2201 519 PANTHER ALLANTOATE DEIMINASE-RELATED 86 513 IPR010158 GO:0016813
Apr1g2201 519 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 157 166 IPR001261 -
Apr1g2201 519 SUPERFAMILY Zn-dependent exopeptidases 86 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2201 Apr-Chr1 31428770 31432890 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2201 K02083 - gmx:100819399 818.15