Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2199 ATGGGGTCCAAAAGAGGCATGGATGAGGCTGAACCACAGAAAAGTTATTGGAGATTTAGCAAACAAGATTTCTTACCAGAAGAGTCCTTTGAAAGCTGGAACAACTATGTTTCTGCTCTTTCACAAACATGGTCAAGGTTCAAGGACCGTTTCTTCAGCAGATCAGATGAAACCACTGAGACAGAAGAGCTAAGGAAACAAAGTGAACATGAAATGAAACGTTGCCTCAACTGGTGGGACCTCATTTGGTTCGGTTTTGGTGCAGTGATTGGTGCTGGAATCTTTGTGCTCACTGGTCAAGAAGCTCATAACCATGCTGGCTCAGCAATTGTCTTATCCTATGTTGCTTCAGGCTTTTCAGCAATGCTTTCAGTTTTCTGCTACACTGAATTTGCTGTAGAAGTTCCATCTGCTGGAGGGTCATTTGCATATCTCCGAGTTGAGTTAGGAGATTTTGTTGCTTTTCTCACAGCTGGGAACATTCTTCTTGAAAGCATTATTGGAAGTGCTGCAGTAGCAAGATCATGGACTTCTTACTTCACAAACCTTTTGAACCGTCCTAAGGATTCACTGCGCATTAAGACAAATCTCAAAGATGGGTACAATTTGCTGGACCCTATAGCTTCTGCGGTTCTTATTATTGCTGCAGTGGTTACAATGATCAGCACAAGGAAAACTTCGATACTCAATTGGATAGCATCTGCAGTGAACACTGCTGTTATTATATTTGTGATCATTGCAGGGTTTATTCATGCTGACACATCAAATTTGACACCTTTTATGCCTTATGGGGCTAAAGGGGTGTTTCAAGCTGCAGCAATTATTTATTTTGCATATGGGGGGTTTGATAGTATTGCAACCATGGCTGAAGAAACCAAAAAACCATCAAGGGATATACCGATAGGCTTGGTTGGGTCAATGTCCATGATCACAGTGATTTATTGCTTAATGGCGCTTGCACTTAGCATGATGCAGAAGTACACAGAGATAGATACAGGTGCTGCTTTCTCAGTTGCATTTCAGAAAGTGGGAATGAAGTGGGCAAAGTATGTGGTAGCTTTTGGTGCATTGAAAGGAATGACCACAGTGCTTTTGGTAGCTAGATTGTCACAGGCGCGTTATATAACTCACATTGCACGTGCCCACATGATCCCACCTTGGTTTGCTCTTGTACATCCAAAGACAGGAACCCCTATAAATGCTACCCTCTTGATTACCATTGCAAGTGCCATCATAGCTTTTTTCTCTGGCTTGGATGTGTTATCAAGCTTGATATCAGTGAGCACACTCTTTGTGTTCATGATGATATCTGTTGCTCTTCTGGTGAGGAGGTACTATGTGAGAGGGGTCACACCAAGAGAGAACCTGTTAAAGCTTGTTATATCCTTGATGCTCATTATTGCTTCCTCAACAGGAATTTCAGCTTACTGGGGGCTTAGGCCTAATGGTTGGTTTGGATACACTCTGACTATTCCTGTTTGGTTCCTTACAACTCTTGGGATGTCACTATTTTTGACTCAGCAAAGGGTGCCAAGAGTTTGGGGTGTTCCTCTTGTGCCATGGTTGCCATCTATGTCAATTGCAACAAATATCTTCCTCATGGGGTCTTTGGAATCTGAGGCCTTCATAAGATTTGGGGTGTGCACCATGGTAATGCTGATCTACTACTTTCTCTTTGGCCTCCATGCAACCTATGATATGGCTCATCAACACGAAAAGATGCAATCTAAAGTTGACTACACAGAGACCATAAAGAATGCAGGGCCTTAG 1770 0.4266 MGSKRGMDEAEPQKSYWRFSKQDFLPEESFESWNNYVSALSQTWSRFKDRFFSRSDETTETEELRKQSEHEMKRCLNWWDLIWFGFGAVIGAGIFVLTGQEAHNHAGSAIVLSYVASGFSAMLSVFCYTEFAVEVPSAGGSFAYLRVELGDFVAFLTAGNILLESIIGSAAVARSWTSYFTNLLNRPKDSLRIKTNLKDGYNLLDPIASAVLIIAAVVTMISTRKTSILNWIASAVNTAVIIFVIIAGFIHADTSNLTPFMPYGAKGVFQAAAIIYFAYGGFDSIATMAEETKKPSRDIPIGLVGSMSMITVIYCLMALALSMMQKYTEIDTGAAFSVAFQKVGMKWAKYVVAFGALKGMTTVLLVARLSQARYITHIARAHMIPPWFALVHPKTGTPINATLLITIASAIIAFFSGLDVLSSLISVSTLFVFMMISVALLVRRYYVRGVTPRENLLKLVISLMLIIASSTGISAYWGLRPNGWFGYTLTIPVWFLTTLGMSLFLTQQRVPRVWGVPLVPWLPSMSIATNIFLMGSLESEAFIRFGVCTMVMLIYYFLFGLHATYDMAHQHEKMQSKVDYTETIKNAGP* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2199 589 Pfam Amino acid permease 76 467 IPR002293 GO:0016020|GO:0022857|GO:0055085
Apr1g2199 589 Gene3D Amino acid/polyamine transporter I 70 499 - -
Apr1g2199 589 Pfam C-terminus of AA_permease 514 563 IPR029485 -
Apr1g2199 589 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 12 577 - -
Apr1g2199 589 PANTHER CATIONIC AMINO ACID TRANSPORTER 5 12 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2199 Apr-Chr1 31415549 31418928 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2199 9 571 Organic Solute Cotransporters AT2G34960 74.113 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2199 - - gmx:100797541 1010.75