Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2184 ATGGCTTCCCATTCTGAATCGGGGGGAACAATGATTCCCCATATTACCCTCAGAACAATACTCTATTTACTCCTCTTGACCCCACCAGCAACACTATCGCTGAATCTCAACCTCACCGCGCTCCTCTCCACCTTCCCAGACCTCTCCCAATTCACCGCCCTACTCTCCTCCGCGACGCCACTCGCCGCCGATCTCTCCCACCGCTCCTCCCTCTCACTCCTCGCCGTCCCAAACTCCTACCTATCCTCCGACGACCACCTCGTCCGCCACCACCTCTCCCCCTCCGCCCTCGCTGATGTCCTCCGCTACCACGTCCTCCTCCAATTCCTGTCATGGTCCGACCTCCGCTCCCTCCCTCCCTCCGGCAAACTCGTCACCACACTCCTCCAAACCACCGGCCGCGCCACCGACGACTTCGGCTCTGTGAACATCACTCGCGACCCCCAATCCGGCGTCGTTTCAATCCACTCACCCGCTCCCTATTCCCCTTCCAACGCCACTCTTCTTTCCCTCGTCAAAACCCTACCATACAACATTACCATCTTCTCCGTCAACTCTCTCCTCATTCCCTACGGCTTCGACCTCATGGCCTCCGAAACTCGCCCTAACCTCGTCCTCAACATCACCAAAGCCCTAATCGACGGCCACAACTTCAACGTCGCTGCCTCCATGCTCTCCGCCTCCGGCGTAGTGCAGGAATTCGAAGCGGACGAAGGCGGCGCCGGAATTACTCTCTTCGTCCCCGTCGACGATGCCTTCGCCGATCTCCCTCCTTCCGTCGCGCTTCAGTCCCTTCCCGCCGATAAGAAAGCCGTTGTTCTTAAATTTCACGTGCTTCATTCCTATTACCCTCTCGGTTCTCTTGAATCCGTGGTTAACCCTCTTCAACCAACGCTTGCCACTGAGGCCATGGGCGCTGGCAGCTTCACACTCAACATTTCCCGCGTTAACGGCTCCGTCGCCATCAACACAGGCATCGTTCAGGCCTCCGTTACGCAGACGGTTTTCGATCAGAATCCCGTCGCCATTTTTGGCGTCTCCAAGGTTCTGTTGCCCAGAGAGATCTTCGGCAGGAATCCTATTGTGTCTGCCAAGCCTCTCGATGGTGCTCCTCCGCCGGATGATGACGCGCTCCCGCCGGAGAATTCGCCGGGTTTCGATGGCCAACCCTCGCACCTCTCGTCGCCGCCGGGGTTTCGCGAAGATGTGCGGTCTCAAGCTGGTGCTTCTCGATCCTTTGTTGTAGTTGTTCTTTGCTGTATAGGATTATTGTATTTAGTGGTATAA 1287 0.5711 MASHSESGGTMIPHITLRTILYLLLLTPPATLSLNLNLTALLSTFPDLSQFTALLSSATPLAADLSHRSSLSLLAVPNSYLSSDDHLVRHHLSPSALADVLRYHVLLQFLSWSDLRSLPPSGKLVTTLLQTTGRATDDFGSVNITRDPQSGVVSIHSPAPYSPSNATLLSLVKTLPYNITIFSVNSLLIPYGFDLMASETRPNLVLNITKALIDGHNFNVAASMLSASGVVQEFEADEGGAGITLFVPVDDAFADLPPSVALQSLPADKKAVVLKFHVLHSYYPLGSLESVVNPLQPTLATEAMGAGSFTLNISRVNGSVAINTGIVQASVTQTVFDQNPVAIFGVSKVLLPREIFGRNPIVSAKPLDGAPPPDDDALPPENSPGFDGQPSHLSSPPGFREDVRSQAGASRSFVVVVLCCIGLLYLVV* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2184 428 Gene3D FAS1 domain 206 353 IPR036378 -
Apr1g2184 428 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 11 426 - -
Apr1g2184 428 SUPERFAMILY FAS1 domain 35 190 IPR036378 -
Apr1g2184 428 Pfam Fasciclin domain 217 352 IPR000782 -
Apr1g2184 428 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 426 IPR033254 -
Apr1g2184 428 MobiDBLite consensus disorder prediction 364 403 - -
Apr1g2184 428 Gene3D FAS1 domain 36 190 IPR036378 -
Apr1g2184 428 ProSiteProfiles FAS1/BIgH3 domain profile. 35 188 IPR000782 -
Apr1g2184 428 SUPERFAMILY FAS1 domain 212 352 IPR036378 -
Apr1g2184 428 ProSiteProfiles FAS1/BIgH3 domain profile. 205 350 IPR000782 -
Apr1g2184 428 SMART fasc_3 244 353 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2184 Apr-Chr1 31294292 31297840 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2184 - - gmx:100788356 677.937