Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2180 ATGGAGGCCAAATCACAAGCCCCACAATTGCATCATCAGTCTCTCAGCATGACCCCCCTCCCCCAGAATGAAACAAGCGATATTGAATCCACAGATCAACAAGGTACGGAAGAATCACATCCAAATCTACCTTCATTATCCGCAGACAACAAAAATCAGGTGCATGAAGATCAAAAGTCAATCACCAACAAGAGGTACATACCCCTTTTGGTTCTTAATTACCTAATGCTCTTTGTGGGTTCACTCTCTTCAAGTTTGCTCTCCAAGTACTATTTCATCCACAAAGGTTCAAGCAAATGGGTCTCAACTTGGGTTCAGTGCGCAGGTTTTCCTCTCTTGATCATCCCAATTTGTCTCCCATGTATCCTTAAATACACCAAGAGAAAACCCTTCACTGATTTCAGTCTAAAGATGTTTATTTTATCAATTTTTGTTGGTTTTATGTTAGGCCTTAATAATCTTTTGATCTCATGGGGAGTTGCATATCTCCCAGTCTCAACCTCAGCACTTGTCTTGTCCTCTCAACTAGTTTTCAACCTCATTCTCTCAGCCATTATTGTGAAACAAAAGATAACCTTTTCAAACCTTAATTGTGTCATCCTTCTTACCCTAAGCTCCATCATCCTTGCCTTAAATTCTAGTCACGAGAGACCAAAAGGGCTCACACAAAAGAACTACTTCATTGGATTCTTTTGCACCATAGGAGCAGGTTTGTTATTTGCCTTGTATTTGCCAGTGATGGAGAAGATTTACAAGAAGGTGTATTGCTACGAAATGGTGATGGAAATGCAACTCGTAATGGAGATTGCAGCTACAGCATTAGCCACCGTAGGCATGTCATGGGATGGAGGATTTTCTGAAATGAAGGAAGAAAGTCAAAGGGTATTTGATAAGGGAAGCACAGTTTATTGGGTGACAGTGATGGCTAATGTGGTGACATGGCAATTATGCTTTATGGGCACTGCAGGAATGGTGTTTTTGACATCTTCACTAACTGGTGGAATTTGCATGACAGCATTGCTATCCATGAATGTGTTAGGAGGGGTAGTGGTGTACAGAGATGCTTTTGGAGGCTTCAAGGCTGTGTCAACTGTTTTGTGTGTATGGGGATTTTGCTCTTATGTCTATGGGATGTACATTAAAATGAAAAAAAAGAAAAAGAATGAAATAAAATAG 1176 0.4039 MEAKSQAPQLHHQSLSMTPLPQNETSDIESTDQQGTEESHPNLPSLSADNKNQVHEDQKSITNKRYIPLLVLNYLMLFVGSLSSSLLSKYYFIHKGSSKWVSTWVQCAGFPLLIIPICLPCILKYTKRKPFTDFSLKMFILSIFVGFMLGLNNLLISWGVAYLPVSTSALVLSSQLVFNLILSAIIVKQKITFSNLNCVILLTLSSIILALNSSHERPKGLTQKNYFIGFFCTIGAGLLFALYLPVMEKIYKKVYCYEMVMEMQLVMEIAATALATVGMSWDGGFSEMKEESQRVFDKGSTVYWVTVMANVVTWQLCFMGTAGMVFLTSSLTGGICMTALLSMNVLGGVVVYRDAFGGFKAVSTVLCVWGFCSYVYGMYIKMKKKKKNEIK* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2180 391 MobiDBLite consensus disorder prediction 1 51 - -
Apr1g2180 391 MobiDBLite consensus disorder prediction 1 54 - -
Apr1g2180 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 125 215 - -
Apr1g2180 391 PANTHER OS09G0467300 PROTEIN-RELATED 2 386 IPR030182 GO:0015211|GO:0016021
Apr1g2180 391 Pfam Purine nucleobase transmembrane transport 69 384 - -
Apr1g2180 391 PANTHER TRIOSE-PHOSPHATE TRANSPORTER FAMILY PROTEIN 2 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2180 Apr-Chr1 31256116 31259787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2180 53 377 Organic Solute Cotransporters AT1G30840 64.832 2.25e-144 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2180 - - gmx:100795076 535.028