Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2179 ATGACCCCTTGTGTCAAGAACTACACCAGTGACATTGAACTCATTGATCAAGAAATTTGTGGAGAAGAATTAGCACATCCAGATCTACCATCTTCCATGGACAAGACAACAATGCAGTTGCATGCAGATCAAAAGTCTTGCACTAACAAGAGGTACATGCCCCTTTTGGTGACTAATTACCTTTGTCTCTTTGTTGGGTCACTTTGTTCAAGTTTGCTCTCTAAGTACTATTTTATCCACAAAGGTTCAAGTAGATGGGTTTCAACTTGGGTTCAAACTGCAGGCTTTCCTCTCTTGATGATCCCAATTGCTCTCTCTTATCTTCTCAATTTCACTAAGAGAAAACCCTTCACTGATTTCACTCCCAAGATGTTAATTTTGTCCGGCTCAATTGGAGTTGTGCTAGGATTAAACAACCTTCTCTTCTCATGGGGAAATTCATATCTTCCTGTTTCAACATCAGCCCTTCTTTTATCTTCACAACTAGTTTTCAATCTTGTCCTATCAGTGATCATTGTGAAGCAAAAGATAACATTTTCAAACCTTAATTGTGTCATTCTTCTTACCTTAAGCTCCATTCTCCTAGCATTGGATTCTAGTCATGAGAGACTAAAAGGGATAACCCAAAGGAACTACTTGATTGGATTTTTTTGCACCATAGGGGCGGGTTTATTGTTTGCCTTGTACTTGCCAGTGATGGAGAAGGTTTACAAGAAGGTTTATTGCTATGAAATGGTGATGGAAATGCAACTCATAATGGAGATTGCAGCAACAACATTGGCCACAATTGGCATGGCATGGGATGGTGGGTTTTCTGAGATGAAGACAGAGAGTGAGAGGATATTTGATAAGGGAAGCACAGTTTATTGGGTGACAGTGATGGCTAATGTGGTGACTTGGCAACTTTGCTTTATGGGCACTGCAGGAATGGTGTTTCTGACATGTTCATTGACTGGGGGAATTTGCATGACAGCATTGCTATCCATGAATGTGTTAGGAGGGGTGGTGGTGTTCAGAGATGCCTTTGGTGGTGTTAAGGCTGTGTCCACTGCTTTGTGCATGTGGGGGTTCTGCTCTTATGTTTATGGCATCTACAATAAAATGAAGCAACACAAAGATCCAATTAACAAGAAGATTTCTGAGACCTCCTCAGAGTTGATCCGCATCGTGGATCGAGGTGGGAATTTTTGA 1191 0.4114 MTPCVKNYTSDIELIDQEICGEELAHPDLPSSMDKTTMQLHADQKSCTNKRYMPLLVTNYLCLFVGSLCSSLLSKYYFIHKGSSRWVSTWVQTAGFPLLMIPIALSYLLNFTKRKPFTDFTPKMLILSGSIGVVLGLNNLLFSWGNSYLPVSTSALLLSSQLVFNLVLSVIIVKQKITFSNLNCVILLTLSSILLALDSSHERLKGITQRNYLIGFFCTIGAGLLFALYLPVMEKVYKKVYCYEMVMEMQLIMEIAATTLATIGMAWDGGFSEMKTESERIFDKGSTVYWVTVMANVVTWQLCFMGTAGMVFLTCSLTGGICMTALLSMNVLGGVVVFRDAFGGVKAVSTALCMWGFCSYVYGIYNKMKQHKDPINKKISETSSELIRIVDRGGNF* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2179 396 PANTHER TRIOSE-PHOSPHATE TRANSPORTER FAMILY PROTEIN 26 379 - -
Apr1g2179 396 Pfam Purine nucleobase transmembrane transport 56 369 - -
Apr1g2179 396 PANTHER OS09G0467300 PROTEIN-RELATED 26 379 IPR030182 GO:0015211|GO:0016021
Apr1g2179 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 104 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2179 Apr-Chr1 31247860 31249050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2179 39 363 Organic Solute Cotransporters AT1G30840 64.565 1.38e-140 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2179 - - gmx:100794553 592.038