Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2170 ATGCCTCCAGTACCCATAAATGTTGGGCAAATTGACGATGTCCAAGAGCTGAGAAAAACTAAGCCAAGGACAATTCCTCATAGATTTGTACGAGACATGACAGAAAGACCAACAACACAAACTACAACCCTTTCCCCACCATATAATGACATGCCTGTCATTGATTTCTCTAAGCTTACCAAAGGGAACAAAGAGCAAGTACTCACTGAAATTTTCAATCTTGCAACTGCTTGTGAGGAGTGGGGATTTTTTCAGGTAATTAATCATGAGGTTGACCTCAATCTGCTGGAGGGCATAGAGAATCTGAGTAGAGAGTTTTTCATGCTACCTTTGGAAGAGAAGAAGAAATACCCTATGGCTCCAGGCACAGTCCAAGGGTATGGACAGGCTTTTGTTTTCTCAGAGGACCAGAAGCTGGATTGGTGCAACATGTTTGCTCTTGGAATTGAACCTCAATATGTTAGGAATCCAAATCTATGGCCAAAGACACCAGAAAGATTCAGTGAAACAGTGGAAGTGTACTCAGAAGAAATAAGGAAACTGTGCTATGACCTGTTGAAATGCATAGCTTTAGGCCTTGGCTTGAAAGGTGATGTGTTTGAGAAGATGTTTGGTGTAGCAGTGCAAGCCATAAGAATGAATTACTACCCAACATGTTCCAGACCTGACCTTGTTTTGGGTCTGAGTCCACATTCAGATGGAAGTGCCCTCACTGTGCTTCAGCAAGCAAAGGGAGGCCCGGTGGGACTTCAAATACTCAAGGACAATACATGGGTTCCTGTTCAGCCAATTCCAAATGCTCTTGTTATCAACATTGGAGACACAATAGAAGTTCTTACAAATGGAAAATACAGGAGTGTGGAGCATAGAGCTGTGGCTCATGAGGAGAAAGATAGACTCTCAATTGTGACATTTTTTGCTCCTAGCTATGAAGTTGAGCTTGGTCCAATGCCAGAATTTGTGGATGAAAACCACCCATGCAAATACAGAAGATACAATCATGGAGAGTACAGTAAACACTATGTAACAAACAAGTTACAAGGAAAAAAGACCCTGGACTTTGCCAAGATCCCAACCAAAAACCTAAGCTAG 1092 0.4222 MPPVPINVGQIDDVQELRKTKPRTIPHRFVRDMTERPTTQTTTLSPPYNDMPVIDFSKLTKGNKEQVLTEIFNLATACEEWGFFQVINHEVDLNLLEGIENLSREFFMLPLEEKKKYPMAPGTVQGYGQAFVFSEDQKLDWCNMFALGIEPQYVRNPNLWPKTPERFSETVEVYSEEIRKLCYDLLKCIALGLGLKGDVFEKMFGVAVQAIRMNYYPTCSRPDLVLGLSPHSDGSALTVLQQAKGGPVGLQILKDNTWVPVQPIPNALVINIGDTIEVLTNGKYRSVEHRAVAHEEKDRLSIVTFFAPSYEVELGPMPEFVDENHPCKYRRYNHGEYSKHYVTNKLQGKKTLDFAKIPTKNLS* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2170 363 Pfam 2OG-Fe(II) oxygenase superfamily 209 307 IPR044861 -
Apr1g2170 363 Pfam non-haem dioxygenase in morphine synthesis N-terminal 52 162 IPR026992 -
Apr1g2170 363 Gene3D - 8 349 IPR027443 -
Apr1g2170 363 PANTHER PROTEIN SRG1 8 358 - -
Apr1g2170 363 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 206 308 IPR005123 -
Apr1g2170 363 SUPERFAMILY Clavaminate synthase-like 13 349 - -
Apr1g2170 363 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 8 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2170 Apr-Chr1 31175704 31177597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2170 50 357 Glycosyltransferase AT5G59530 36.137 9.07e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2170 - - gmx:100785152 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2170 1 31175704 31177597 Apr1g2170 1 31175704 31177597 ECH