Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2161 ATGATATTTGTGAATTATGTGATGTTTCAGGTTATAGTTGGAAAGGGGGTGTTAGTGGCAATGGGGGAGGAACCTAGCCAGCTGAAGCGGGCTTTGATTGATTCCTCTGCTGGTGCTATTTCCGGCGCTATATCAAGGACAGTTACGTCACCCCTCGACGTTATTAAGATTAGGTTTCAGGTTCAACTAGAGCCCACGTCTTCATGGACTTTACTACGCAAGGACTTGTCTACACCCTCAAAATATACAGGCATGCTTCAAGCAAGCAAAGATATATTGAGAGAAGAAGGAATACAGGGCTTTTGGCGGGGTAATGTGCCAGCGTTGCTCATGGTTATGCCATATACAGCTATACAATTTACTGTTTTACACAAGTTGAAGTCTTTTGCCTCTGGTTCTTCCAAGACAGAGAATCACATTAATTTGAGCCCATATCTATCCTATATGAGTGGGGCATTGGCTGGGTGTGCAGCTACTGTAGGGTCATATCCCTTTGATCTTCTCCGAACCATATTAGCTTCTCAGGGTGAACCGAAGATTTATCCAAACATGAGGACAGCATTAGTTGATATTCTCCAAGCTCGTGGCTTCCAAGGCTTGTATGCTGGATTGTCACCAACACTAGTTGAGATCATACCATATGCAGGCTTACAATTTGGCACCTATGATACTTTTAAACGTTGGACCATGGTGTGGAACCAACGTAAATATTCAAATACTACTGCAGAAGTTAGTCCCTCTAGTTTTCAGCTTTTCCTGTGTGGGTTGGCAGCAGGAACATGTGCCAAGCTCGTTTGTCATCCTCTTGATGTCGTCAAGAAAAGATTTCAGATTGAAGGTCTACAAAGACATCCAAGATATGGAGCTCGGGTTGAACATCGTGCATACAGCAATATGTTTGACGCCATGAAACGAATATTACAAATGGAGGGTTGGGCTGGTCTATATAAGGGTATAATCCCATCAACTGTAAAAGCTGCACCAGCTGGCGCTGCAACTTTTGTTGCATATGAATTGACATCAGAGTGGCTGGAATCTATTTTGACTTGA 1050 0.4324 MIFVNYVMFQVIVGKGVLVAMGEEPSQLKRALIDSSAGAISGAISRTVTSPLDVIKIRFQVQLEPTSSWTLLRKDLSTPSKYTGMLQASKDILREEGIQGFWRGNVPALLMVMPYTAIQFTVLHKLKSFASGSSKTENHINLSPYLSYMSGALAGCAATVGSYPFDLLRTILASQGEPKIYPNMRTALVDILQARGFQGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMVWNQRKYSNTTAEVSPSSFQLFLCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHRAYSNMFDAMKRILQMEGWAGLYKGIIPSTVKAAPAGAATFVAYELTSEWLESILT* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2161 349 Gene3D Mitochondrial carrier domain 26 346 IPR023395 -
Apr1g2161 349 PANTHER SOLUTE CARRIER FAMILY 25 24 348 - -
Apr1g2161 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 29 129 IPR018108 -
Apr1g2161 349 Pfam Mitochondrial carrier protein 143 229 IPR018108 -
Apr1g2161 349 Pfam Mitochondrial carrier protein 35 130 IPR018108 -
Apr1g2161 349 Pfam Mitochondrial carrier protein 247 344 IPR018108 -
Apr1g2161 349 PRINTS Mitochondrial carrier protein signature 34 47 IPR002067 GO:0055085
Apr1g2161 349 PRINTS Mitochondrial carrier protein signature 47 61 IPR002067 GO:0055085
Apr1g2161 349 PRINTS Mitochondrial carrier protein signature 104 124 IPR002067 GO:0055085
Apr1g2161 349 PRINTS Mitochondrial carrier protein signature 157 175 IPR002067 GO:0055085
Apr1g2161 349 PRINTS Mitochondrial carrier protein signature 201 219 IPR002067 GO:0055085
Apr1g2161 349 PRINTS Mitochondrial carrier protein signature 255 277 IPR002067 GO:0055085
Apr1g2161 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 142 228 IPR018108 -
Apr1g2161 349 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 24 348 - -
Apr1g2161 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 246 343 IPR018108 -
Apr1g2161 349 SUPERFAMILY Mitochondrial carrier 30 338 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2161 Apr-Chr1 31074789 31079639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2161 23 349 Organic Solute Cotransporters AT3G21390 74.018 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2161 K15108 - gmx:100803750 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2161 1 31074789 31079639 Apr1g2161 1 31074789 31079639 ECH