Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2156 ATGGATGCAAAACCTTCTCAACTTGTTTCACAACCTTTGACGTATCAGACATGGTTCTTGAAAGTTTCTATCCACTGTGAAGGTTGCAGGAGGAAAGTGAAGAAAGTTCTGAAGAGCATTGATGTGCTTTGGGTTGTTGAGAAGAGAATGTTGCACTTTGCAGGTGTTTTCACAGCAACAATAGACCCACATCAGCAGAAAGTAACAGTCACTGGAAGTGTAGGTGTTGAGACCCTTCTCCGAAAACTGGTCAGAGCCGGAAAGCATGCCGAGATATGGCCGGAGAATCTCGACGGCAAGGGGAAAATCACCGGCAAAGGTGAGAAGAACAAGAAGAATGAACAAAGAGAATCAAAGAGCTTGGAAAACAAGGGAACTGAAAATAGTGATGCTAAGTGTGAAAGCAGCGACTCAAAGACCGGCGACAACTCGCCGGGAAAGTCTCCGGCCGTTGACCAGGTTTCGCCGGAGGGTGGTCAGGGAGAAGGTGGAGGAGGGGGTTCTAGTAAGAATAAGAAAAAGAAAGGGCCAGGTGATGGCAATGGAAGCAGGGGTGTGGGTTCAGCAGCTAGTGGTGCACCTGCACACACTGGATTCCAGTTTCAGAATCTTGTGGGCCAGCAAATGGGCCAAGTGAATCTCAGCCCTACACGTCAGCAATCATTCTCGTACCCAGAATCTGGTTATTATCCTCCAATGTTTTATGTTGCCACTTATAACAGGTTATATCCCATGGCAAGAATTGGTGGTCCTTCTTACTATGTTCCATCTTCACCCTACACGTGTGCAGGCCTAGACCAAGATAATAATTATTTTCAATCTGCACCGTTGGTTTCCTTTGAGATCTTCAGTGATGAGAATGCAAATGGGTGTTCCATTATGTAA 885 0.4621 MDAKPSQLVSQPLTYQTWFLKVSIHCEGCRRKVKKVLKSIDVLWVVEKRMLHFAGVFTATIDPHQQKVTVTGSVGVETLLRKLVRAGKHAEIWPENLDGKGKITGKGEKNKKNEQRESKSLENKGTENSDAKCESSDSKTGDNSPGKSPAVDQVSPEGGQGEGGGGGSSKNKKKKGPGDGNGSRGVGSAASGAPAHTGFQFQNLVGQQMGQVNLSPTRQQSFSYPESGYYPPMFYVATYNRLYPMARIGGPSYYVPSSPYTCAGLDQDNNYFQSAPLVSFEIFSDENANGCSIM* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2156 294 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 10 294 - -
Apr1g2156 294 SUPERFAMILY HMA, heavy metal-associated domain 13 94 IPR036163 GO:0046872
Apr1g2156 294 MobiDBLite consensus disorder prediction 96 195 - -
Apr1g2156 294 MobiDBLite consensus disorder prediction 96 137 - -
Apr1g2156 294 CDD HMA 20 91 IPR006121 GO:0046872
Apr1g2156 294 Gene3D - 14 92 - -
Apr1g2156 294 ProSiteProfiles Heavy-metal-associated domain profile. 23 92 IPR006121 GO:0046872
Apr1g2156 294 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 10 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2156 Apr-Chr1 31032723 31033860 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2156 - - gmx:102666396 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2156 1 31032723 31033860 Apr1g2156 1 31032723 31033860 ECH
Apr9g2234 9 30221037 30222099 Apr1g2156 1 31032723 31033860 PCT