Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2153 ATGGCTTCTCAAACCTTGCATGAAACAAAGAAAGCCCAAGCAAAGAGAGCAATACGTTCCCTTGCAATAGGCATTGCTGTCCCTTTCACCCTTACATTGACCATAATCATCCTCTTTGGTTCAGGCCGCAAGTACCACCGCTTCGCCAAGCCCTTTTGGTTCGCACCACTTTGGTTCATTCACTTAGCCACGTTGGGTTCATCTTTGTTCATAGGTCTTGCGGCTTGGCTTGTGTGGGCCGATGGTGGGTTTCAAGGGGAATCAGATGCAATGTCCCTCTACATAGCTCATATCTCTTTAAGCATGGTGTGGCACCCCATTGTGCTTGTCATGAGTGCATATTGGCTTGCCTCAATTTCTTGCCTTGTCAACTTTGTGACCCTTTTTTTGTGTTACTTGAGGTTTAGAAAGGTGAACCCATTTGCTAAAGATCTAGCCAAACCTTGCCTAATGTGGGCTGCATATCTCACCCTAATTAGCGTCAAGCTAATGTTTCTTTGA 501 0.4571 MASQTLHETKKAQAKRAIRSLAIGIAVPFTLTLTIIILFGSGRKYHRFAKPFWFAPLWFIHLATLGSSLFIGLAAWLVWADGGFQGESDAMSLYIAHISLSMVWHPIVLVMSAYWLASISCLVNFVTLFLCYLRFRKVNPFAKDLAKPCLMWAAYLTLISVKLMFL* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2153 166 PIRSF PBR 10 166 IPR004307 GO:0016021
Apr1g2153 166 Pfam TspO/MBR family 39 165 IPR004307 GO:0016021
Apr1g2153 166 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 3 166 IPR004307 GO:0016021
Apr1g2153 166 CDD TSPO_MBR 21 158 IPR004307 GO:0016021
Apr1g2153 166 Gene3D TspO/MBR protein 15 166 IPR038330 -
Apr1g2153 166 PANTHER TSPO/MBR FAMILY PROTEIN 3 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2153 Apr-Chr1 31007081 31007581 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2153 K05770 - gmx:100790873 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2153 1 31007081 31007581 Apr1g2153 1 31007081 31007581 ECH