Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2152 ATGCTGGAGCGTTGCCTGGGAACTCGGCGGGTCCGTCAGATCCATAGAGCGTGCCGTCACAGCACCGTCACCTTCCTCTGTCTCTTCCTCACCGTCATCGTCCTCCGTGGCACCATCGGTGCCGGAAAATTCGGCACGCCGGAGCAAGACTTCAACGAGATCCGCCAGCACATCTCTGCCGCCCGTGCCCGCCGCGTCCTTGAAGAATCCAAACCTGACACTGCCTCCGACACCACCTCCACCAACTACGCCACCTTCGATCTCTCCAAGATCCTCGTCGACGAAGACACCGGCGACGAGCATAAGCGTGACCCTAACGCGCCCTACACTCTCGGCCCCAAAATCTCGGATTGGGACCAACAGCGCCAACAATGGCTCCGAGATAACCCTGATTACCCGAATTTCATCGGATCCAACAAACCACGGGTTCTGTTAGTAACCGGTTCATCGCCCAAACCGTGTGAAAACCCGGTTGGGGACCATTATCTTGTGAAATCGATTAAGAACAAGATTGATTATTGTAGGGTTCACGGGATTGAGATATTCTACAACATGGCTCTTTTAGATGCTGAGATGGCAGGGTTTTGGGCTAAGCTTCCTTTGATTCGTAAACTGTTACTGTCTCATCCTGAGGTTGAGTTTCTCTGGTGGATGGATAGTGATGCAATGTTCACCGACATGGCTTTTGAAGTGCCTTGGGAAAGGTACAAGGATTACAATTTTGTGATGCATGGGTGGAATGAGATGGTGTATGATGAGAAGAATTGGATTGGTTTGAACACTGGGAGTTTTCTTTTGAGGAATTGTCAATGGTCTTTGGATATTCTTGATGCTTGGGCTCCAATGGGTCCAAAGGGGAAGATAAGGGATGAAGCAGGGAAATTGCTCACTAGGGAGCTTAAGAATAGGCCTGTTTTTGAAGCTGATGATCAATCTGCTATGGTTTATTTGTTGGCTACTGGGAGGGAGAAATGGGGTGAAAAGGTTTACCTTGAGAATGCCTATTACTTGCATGGGTATTGGGGGATTTTGGTGGACCGTTATGAGGAAATGATCGATAATTACCACCCTGGACTTGGGGATCATAGGTGGCCTTTGGTTACTCACTTTGTGGGGTGTAAGCCTTGTGGGAAGTTTGGGGATTACCCGGTTCAGAGGTGCTTGAAACAGATGGATAGGGCTTATAATTTTGGGGATAACCAGATTTTACAGATGTATGGGTTCACTCACAGGACACTTGCTAGTCGCAAGGTGAAGAGAGTGAGGAATGATACAAGCAATCCAATTGATGTCAAGGATGAACTTGGATTGCTTCATCCAGCTTTCAAAGCTATCAAGCTTTCATCTTCTTCTTGA 1356 0.483 MLERCLGTRRVRQIHRACRHSTVTFLCLFLTVIVLRGTIGAGKFGTPEQDFNEIRQHISAARARRVLEESKPDTASDTTSTNYATFDLSKILVDEDTGDEHKRDPNAPYTLGPKISDWDQQRQQWLRDNPDYPNFIGSNKPRVLLVTGSSPKPCENPVGDHYLVKSIKNKIDYCRVHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDYNFVMHGWNEMVYDEKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKIRDEAGKLLTRELKNRPVFEADDQSAMVYLLATGREKWGEKVYLENAYYLHGYWGILVDRYEEMIDNYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVQRCLKQMDRAYNFGDNQILQMYGFTHRTLASRKVKRVRNDTSNPIDVKDELGLLHPAFKAIKLSSSS* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2152 451 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 138 336 IPR029044 -
Apr1g2152 451 PANTHER - 4 450 - -
Apr1g2152 451 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 4 450 IPR008630 GO:0016021|GO:0016757
Apr1g2152 451 Pfam galactosyl transferase GMA12/MNN10 family 140 379 IPR008630 GO:0016021|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2152 Apr-Chr1 31001015 31003129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2152 1 451 Glycosyltransferase AT4G02500 78.571 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2152 K08238 - gmx:100813899 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2152 1 31001015 31003129 Apr1g2152 1 31001015 31003129 ECH