Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2146 ATGTTGGTTTACCAGGACCTCCTTACAGGTGATGAGCTTCTCTCTGACTCCTTTCCTTATAAGGAAATTGAGAATGGATTGTTGTGGGAAGTTGAGGGAAAGTGGGTCGTTCAAGGAGCTATTGAGGTAAACATTGGTGCAAACCCTTCTGCTGAAGGTGGAGAAGATGAGGGTGTTGATGACCAAGCTGTGAAGGTTGTTGACATTGTTGACACATTCAGACTTCAGGAACAACCTGCTTTTGACAAGAAGCAGTTTGTTACTTTCATGAAGAGGTTTATCAAGAATTTGACACCCAAACTTGAGGGAGAGAAACAAGAGTTGTTTAAAAAGCACATTGAGGGAGCAACAAAATTCCTGCTCTCCAAGATTAAGGATCTTCAGTTCTTTGTTGGGGAGAGCATGCATGATGATGGTTGCTTGGTCTTAGCCTACTACAAGGACGGTGCTACTGATCCCACATTTCTGTACTTTGCACATGCTTTAAAGGAGGTGAAGTGCTAA 504 0.4286 MLVYQDLLTGDELLSDSFPYKEIENGLLWEVEGKWVVQGAIEVNIGANPSAEGGEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRFIKNLTPKLEGEKQELFKKHIEGATKFLLSKIKDLQFFVGESMHDDGCLVLAYYKDGATDPTFLYFAHALKEVKC* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2146 167 Gene3D Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A 1 167 IPR011323 -
Apr1g2146 167 SUPERFAMILY Mss4-like 1 167 IPR011057 -
Apr1g2146 167 ProSitePatterns Translationally controlled tumor protein (TCTP) domain signature 2. 124 146 IPR018103 -
Apr1g2146 167 Pfam Translationally controlled tumour protein 1 163 IPR018105 -
Apr1g2146 167 ProSitePatterns Translationally controlled tumor protein (TCTP) domain signature 1. 45 55 IPR018103 -
Apr1g2146 167 PANTHER TRANSLATIONALLY-CONTROLLED TUMOR PROTEIN HOMOLOG 1 167 - -
Apr1g2146 167 PANTHER TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED 1 167 IPR018105 -
Apr1g2146 167 ProSiteProfiles Translationally controlled tumor protein (TCTP) domain profile. 1 167 IPR034737 -
Apr1g2146 167 PRINTS Translationally controlled tumour protein signature 1 21 IPR018105 -
Apr1g2146 167 PRINTS Translationally controlled tumour protein signature 46 57 IPR018105 -
Apr1g2146 167 PRINTS Translationally controlled tumour protein signature 59 78 IPR018105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2146 Apr-Chr1 30941137 30943164 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2146 - - pda:103707244 320.087