Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2135 ATGCCAGAACCGAGTTTCTTTGTTGGAGTGATAGGTAACATCATCTCAATTCTCATGTTTCTTTCTCCTGTACCCACGTTTTGGCGAATAATGAAGCACAAATCTACCGAAGATTTCTCCAGCATTCCTTACATTTGCACATTGCTTAATTGTTCTCTTTGGACTTACTATGGAATCATAAAGGCTGGAGAATACCTCGTGGCCACTGTTAATGGCTTTGGCATCGTGGTGCAGACAATCTACATTATTCTATTTCTTATATATGCTCCAAAAGGGATAAGGGCCAAGACTTCAATTCTCTTCGGGATTGTGGATGTGGGAATCTTGGCAGTAGCAGTGATTGTTACTCAGTTAACATTGCACGCAGAGGCTCGTAGTGGTGCTGTCGGTATTATGGGTGCAGGCTTAAACATTGTTATGTATTCTTCACCTCTTTCTATCATGAAAACAGTGGTGACAACAAAGAGTGTGGAGTATATGCCATTCTTCCTTTCGTTTTTCTTCTTTGTAAACGGTGGCGTTTGGCTGTTGTACGCTGTTCTTGTTCGTGATGTTATCCTTGCGGTACCAAACGGTAGTGGATTTTTACTGGGAGCAATGCAACTGGGGCTGTATGGGATCTACAGAAAAGGAAAGCATATCTCAAATATTGGATTGGAAGAAGGATTGCAACATCAGCATCTCATCTCACAGTCAAATCATGAGAGGCTAGCCAGACCCATCTAG 726 0.4215 MPEPSFFVGVIGNIISILMFLSPVPTFWRIMKHKSTEDFSSIPYICTLLNCSLWTYYGIIKAGEYLVATVNGFGIVVQTIYIILFLIYAPKGIRAKTSILFGIVDVGILAVAVIVTQLTLHAEARSGAVGIMGAGLNIVMYSSPLSIMKTVVTTKSVEYMPFFLSFFFFVNGGVWLLYAVLVRDVILAVPNGSGFLLGAMQLGLYGIYRKGKHISNIGLEEGLQHQHLISQSNHERLARPI* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2135 241 PANTHER RAG1-ACTIVATING PROTEIN 1 4 216 - -
Apr1g2135 241 Pfam Sugar efflux transporter for intercellular exchange 7 91 IPR004316 GO:0016021
Apr1g2135 241 Pfam Sugar efflux transporter for intercellular exchange 129 212 IPR004316 GO:0016021
Apr1g2135 241 Gene3D - 7 91 - -
Apr1g2135 241 Gene3D - 127 214 - -
Apr1g2135 241 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET17 4 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2135 Apr-Chr1 30873065 30877197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2135 1 241 Miscellaneous Gene Families AT4G15920 55.785 1.51e-92 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2135 K15382 - gmx:100808537 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2135 1 30873065 30877197 Apr1g2135 1 30873065 30877197 ECH