Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2134 ATGAGCGAAGACACTAAGAAGAACATTGCCGGAGCTCCGACGCCGAGGCCCAATTCCGATGACCGGAAACCGTTACCTTTACCGTCACCTGCGCCTCCAGTTCCCCCCAAGAAGGTCATCATCAAGAGCGCCGATATGATCCCCGACATGCAGAAGGAGGCCGTTGATATCGCCGTCACTGCGTTTGAGAAGTACAATGTGGAGAAAGATGTTGCAGAACAGATAAAGAAGGAGTTCGATAAGAGGCATGGCCCCACTTGGCATTGCATCGTTGGTCGTAATTTTGGCTCATATGTGACTCATGAAACAGACCACTTCGTCTATTTCTATTTGGATCAGAAAGCGGTTTTACTCTTTAAATCTGGTTAA 369 0.4824 MSEDTKKNIAGAPTPRPNSDDRKPLPLPSPAPPVPPKKVIIKSADMIPDMQKEAVDIAVTAFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETDHFVYFYLDQKAVLLFKSG* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2134 122 Pfam Dynein light chain type 1 38 121 IPR001372 GO:0007017|GO:0030286
Apr1g2134 122 MobiDBLite consensus disorder prediction 1 35 - -
Apr1g2134 122 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 36 122 IPR037177 GO:0007017|GO:0030286
Apr1g2134 122 ProSitePatterns Dynein light chain type 1 signature. 88 102 IPR019763 GO:0005875|GO:0007017
Apr1g2134 122 SMART Dynein_light_2 34 121 IPR001372 GO:0007017|GO:0030286
Apr1g2134 122 MobiDBLite consensus disorder prediction 19 35 - -
Apr1g2134 122 PANTHER DYNEIN LIGHT CHAIN 5 122 - -
Apr1g2134 122 PANTHER DYNEIN LIGHT CHAIN 5 122 IPR001372 GO:0007017|GO:0030286
Apr1g2134 122 SUPERFAMILY DLC 33 122 IPR037177 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2134 Apr-Chr1 30864300 30868032 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2134 K10418 - gmx:100777142 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2134 1 30864300 30868032 Apr1g2134 1 30864300 30868032 ECH