Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2127 ATGACTAAAGATACTTCGGAACCTGGGGGAAGTGGCGGCGGTGGCTTCCACGCGGTTCACGCGGAGCGTGACCTAGAATCTAACTGGGAAGTTGACCTCGCCAAGAAACTTGAGGAGTATCTGCTAAAAATTTGCTCCGGCGAGATTACCGGAGAAGAAGAAGGCCATATTCCAGTAAATTTTGCCGAAGCTGCTCTGCTGCTTCAGGGTTCCATACAGGTGTATAGTCGGAAGGTGGAATATCTCTACACGTTGGTGTTACGTGCTTTGGAGTATCTTTCTCAGAAAAGACAGCAAGATCATATAGATGGGTCATCAGTCCAACCAGAAGAATGTGGTCCCCATGCCATTGTTGATGAAGAAAACGATCAATTCTGGGGCTTAGATGACGTCCCAGTTGAAGAGAAGATTTCCTTGGATGGTACAACAGGCAAAGAAGTGAATTTGGATCTATTTATAAAACCTCCTGCAAATTTAGTTGTTCTTGAAGGTGACTGCTTGGATGCTGTAGGTGATGGAGGGGAATTGGAGTCTTATCTGTTGTCCACCACAGATTTGTACCAGGACTTTATTTTATTGGACACATCTGATGCTGTTGCCGTTAATCAGTTTCTGAAGAGCAGCAAAGCTGGTACCACTCAAAATGGTGCTAATAGAGGAACCTCAACTCGTAAAAGCTTTCTTTCTCCCAGACGTTCTGGTGGAAGTGCTCATAGATCATCAGCTGCTAAGAGTCAGCGTGCTAATTCCAACTTCTCTCCTAAACTTAACTGTAGATTTGATGAGGAAAATGTTCGGCCCAACACTCCTACTTGTGATGGTCTTGGTAACAATGACTTTGGATTTAATATGGGTGATGCATCTAGGGATTCAGACAATTCAGATGCTGATAATGATGATCCATGGAAACCTTTGAATCCTCATGAACCAGGCAACTTGAGGGTGAAGCCATTCAGAAAAGTGAAAGTTTTAAAAAAGAATGGCTTTAATGTAACACAACCGGTTGCTATGAGGACCTTGTTTCCACCTGCAAAATTGCATGGTCCTATCAGTACAGAGCTCATGGAAATGTGGGAGATGCGACAACATGTTCACGATCCACAGAGGGATTCTCAACCTCTAACATTATATGAGAAGCTTAGGCAATCTATGATTAATGAGGTGAATGAAACCAGTGGTACTTTTTTTAACTCTGAAGCTGACAATGATGACAACGACTTTGATGGTGGAAATCCTGAATTTGATATGCCAGACAATGCCTGTACGGATGAAGATCTACTTCCTTGCAGTAAAGAGCATGAAATTGATGATGCCCATACCAAGGCTGATGAAGCTGTAGATCTTGAATGTCCAGATTCTCAGGCTAGTTTGGAAGATCTGTGCCGCTCTCACCTGAATGCTCTGCTAGCAAGCATTGCTGAAACTGAAAAGCAAACTGAAATGGCTGCAAGGGTTTCAACATGGAAACAAAGAATTGATAACAACTTGGAAGAACAGGAATCACACCCGCCATTTGATATCCAAGACTATGGTGAGAGAATTCTCGACAAACTATCCCTCGAAGCAAGCAGTAGTGGTGTCCTTTCCTTTTCAGATTTGGTCAAGGGTCAAGAGAAGTATGATGTGGCCCGAAGTTTTTCTTCTCTTCTTCAACTGGTGAACAATGGAGAAGTCAATCTACAGAGAAATGGAGTTGATGGGGAGTCTATCTGCTACACATCTGTGGATCCCTTTCATGTTAGGCTCCTTAAGCATGATAAGAAACGGGAGAACGTGCAACTTCATTTGTCAAAAGAGAGAGCCAAGTCTCCAACAAAAAAGCCATCTATAAAAGGTAACAAGAACAAAACTAAAAGAGAAAAATCTCCCACATCTTCTAGGAAACATGGTCAAACAGGGTTGTCACCACCAGCAAATTGTAAGTTTTCTGTAAAGCTTGGAAAGGCGAGTGCCATAAAATTCTCTCCCGAAGCCAAGAGAAGGCGTAGATCTCAGTATGTTGAACCAGTTAACCAACATTAA 2022 0.4273 MTKDTSEPGGSGGGGFHAVHAERDLESNWEVDLAKKLEEYLLKICSGEITGEEEGHIPVNFAEAALLLQGSIQVYSRKVEYLYTLVLRALEYLSQKRQQDHIDGSSVQPEECGPHAIVDEENDQFWGLDDVPVEEKISLDGTTGKEVNLDLFIKPPANLVVLEGDCLDAVGDGGELESYLLSTTDLYQDFILLDTSDAVAVNQFLKSSKAGTTQNGANRGTSTRKSFLSPRRSGGSAHRSSAAKSQRANSNFSPKLNCRFDEENVRPNTPTCDGLGNNDFGFNMGDASRDSDNSDADNDDPWKPLNPHEPGNLRVKPFRKVKVLKKNGFNVTQPVAMRTLFPPAKLHGPISTELMEMWEMRQHVHDPQRDSQPLTLYEKLRQSMINEVNETSGTFFNSEADNDDNDFDGGNPEFDMPDNACTDEDLLPCSKEHEIDDAHTKADEAVDLECPDSQASLEDLCRSHLNALLASIAETEKQTEMAARVSTWKQRIDNNLEEQESHPPFDIQDYGERILDKLSLEASSSGVLSFSDLVKGQEKYDVARSFSSLLQLVNNGEVNLQRNGVDGESICYTSVDPFHVRLLKHDKKRENVQLHLSKERAKSPTKKPSIKGNKNKTKREKSPTSSRKHGQTGLSPPANCKFSVKLGKASAIKFSPEAKRRRRSQYVEPVNQH* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2127 673 MobiDBLite consensus disorder prediction 290 304 - -
Apr1g2127 673 Pfam Condensin II complex subunit CAP-H2 or CNDH2, C-term 301 592 IPR031737 -
Apr1g2127 673 PANTHER CONDENSIN-2 COMPLEX SUBUNIT H2 5 664 IPR031739 GO:0030261
Apr1g2127 673 MobiDBLite consensus disorder prediction 210 255 - -
Apr1g2127 673 MobiDBLite consensus disorder prediction 589 606 - -
Apr1g2127 673 Gene3D Structural maintenance of chromosome 1. Chain E 506 568 IPR023093 -
Apr1g2127 673 MobiDBLite consensus disorder prediction 283 313 - -
Apr1g2127 673 Pfam Condensin II complex subunit CAP-H2 or CNDH2, N-terminal 17 131 IPR009378 -
Apr1g2127 673 Pfam Condensin II complex subunit CAP-H2 or CNDH2, mid domain 154 284 IPR031719 -
Apr1g2127 673 MobiDBLite consensus disorder prediction 589 673 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2127 K11490 - gmx:100786571 1032.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2127 1 30790170 30795300 Apr1g2127 1 30790170 30795300 ECH