Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2125 ATGGCGAGGAATACTATTGACCTTGTATCCAATCTCAACGTAGCACAACACTTCTCCATCGACTCAACCCTCCGCTATTGCTCCTCCAATGTCTCTGGCTTCCCTCATTCCCCTACTCACTTCACCATCTCCCAGTTTGGGCATGGACAATCCAACCCCACGTACTTGTTGGAAGCGGGTTCACATGGCTCCTCGGTGAAGCGCTATGTTCTCAGGAAGAAGCCTCCAGGGATGTTGCTGGCTTCAGCTCATGCTGTCGAAAGAGAGTTTCAGGTTCTGGAGACATTAGGCACTCATACCCAAGTTCCGGTTCCTAAGGTTTTTTGTTTGTGCAATGATCCAAGTGTTATTGGAACAGCATTTTATATCATGGAATTTTTGGAGGGACGCATATTTATTGACCCCAAGCTACCAGGTGTGACACCGGAGAGGAGGAGGGAAATTTACCGGGAAACTGCAAAAACCTTAGCTTCCTTACATTCTGCTAATGTGGACTCAATTGGTCTCGGAAAATATGGGCGGCGAAATGATTATTGCAAAAGACAGATTGAGAGGTGGGCTAAGCAATATATTGCCTCAACTAGTGAGGGTAAACCTGCAAGAAATCCAAAAATGTTTGCCCTGGTTGATTGGCTGCAGCATCAAATCCCTCCCGAAGATTCTTCAGGAGAAACAGCAGGTCTGGTTCATGGAGATTTTCGCATTGACAATCTTGTGTTCCATCCCACAGAGGATCGAGTAATTGGAATACTAGACTGGGAATTGTCTACCCTTGGTAACCAAATGTGTGATGTCGCATATTGCTGTATGCCTTATATTGCAGATATTGGATTTGAAAAAGTACAAGAAGGTTTGGAACTTTTTGGATTACCTGAGGGAATTCCTTCACTACCAGAATATTTGGCTGATTACTGCTCTGTAGCAGGAAGAAAATGGCCTGCTACTGAATGGAAGTTCTATGTTTCCTTTTCTTTGTTCCGTGGGGCTTCAATTTATGCTGGAGTGTATAATAGATGGGTTAAGGGCAATGCATCAGGAGGTGAGCGTGCTCGACACACAGCAGTACTTGCTAATGGCCTTATAGATGCTGCTTGGGAATTTATTGAACGCAAATCTGTACTTCCGCACCATCCTCCCTCAGGTAATGCAAATGCACGACACTATTCAAAGGAGTTGGTGAATGGGAATGATATGCAGGGCCTCTCAAATCAGGGGAAGTTTGTTCCTAGTCAAAAGGTTTTGGTGCTGAGGAACAAATTAATTAAGTTCATGGAGGAACACATATACCCCTTGGAAAATGAATTTTTTAAACTTGCCCAGTCAGAATCACGTTGGACTGTTCACCCAGAAGAGGAAAAGTTAAAGGAAATTGCAAAGAGAGAAGGCTTGTGGAACTTATGGATTCCTCTTGATAGTGCTGCAAGGGCAAAAAATCTTATTTTTGATGGAAGCAATAGTGATCTCTCTAGTGATGCAAATGAGTTGTTATTGGGTGCTGGACTTACAAATCTCGAATATGGATACCTTTGTGAGATCATGGGTCGTTCTACTTGGGCTCCACAAGTGTTTAATTGTGGTGCACCTGACACAGGTAATATGGAGGTATTACTACGCTATGGAAATAAAGAACAACTACGAGAATGGCTTATTCCTTTGCTTGAGGGGAAGATTAGGTCTGGATTTGCAATGACAGAACCACGTGTTGCATCTTCTGATGCAACCAATATTGAGTGCTCTATCAAAAGGCAAGGAGATTCATATATTATCAATGGGACAAAATGGTGGACAAGCGGTGCTATGGATCCAAGATGTAGAATTCTTATAGTTATGGGCAAAACTGACTTCAATGCAGCAAAGCATAAACAGCAATCTATGATCTTGGTGGATATCCAGACTCCTGGTGTTCACATAAAGAGACCACTGACAGTGTTTGGCTTTGACGATGCTCCTCATGGGCATGCAGAAGTAACATTTGAAAATGTTTGTGTGCCAGCAAAAAACATCATACTGGGTGAAGGACGTGGATTTGAGATTGCTCAAGGTAGGCTTGGTCCTGGAAGGCTGCACCATTGTATGAGACTGATAGGTGTTGCTGAACGAGGCATGCATATGATGGTTCAAAGAGCTCTTAATAGAAGAACATTTGGGAAGTTGATTGCTCAACATGGTTCATTTCTTTCAGATATGGCCAAGTGCCGAATAGAGCTAGAGAAGACCAGATTGTTAGTGTTGGAAGCGGCTGATCAGCTTGATAGGCATGGGAACAAAAAAGCTCGGGGGATAATAGCAATGGCAAAGGTAGCTGCGCCAAACATGACTCTAAAGGTGATTGACATGGCAATCCAAGTGCATGGAGCAGCTGGTGTATCATCTGACACAGTCCTGGCACACATGTGGGCAACTGCAAGGACATTGAGAATCGCAGATGGTCCAGATGAAGTCCACCTGGGGACCATAGCCAAGTTAGAACTACAGAGAGCCAAGCTTTAA 2490 0.4382 MARNTIDLVSNLNVAQHFSIDSTLRYCSSNVSGFPHSPTHFTISQFGHGQSNPTYLLEAGSHGSSVKRYVLRKKPPGMLLASAHAVEREFQVLETLGTHTQVPVPKVFCLCNDPSVIGTAFYIMEFLEGRIFIDPKLPGVTPERRREIYRETAKTLASLHSANVDSIGLGKYGRRNDYCKRQIERWAKQYIASTSEGKPARNPKMFALVDWLQHQIPPEDSSGETAGLVHGDFRIDNLVFHPTEDRVIGILDWELSTLGNQMCDVAYCCMPYIADIGFEKVQEGLELFGLPEGIPSLPEYLADYCSVAGRKWPATEWKFYVSFSLFRGASIYAGVYNRWVKGNASGGERARHTAVLANGLIDAAWEFIERKSVLPHHPPSGNANARHYSKELVNGNDMQGLSNQGKFVPSQKVLVLRNKLIKFMEEHIYPLENEFFKLAQSESRWTVHPEEEKLKEIAKREGLWNLWIPLDSAARAKNLIFDGSNSDLSSDANELLLGAGLTNLEYGYLCEIMGRSTWAPQVFNCGAPDTGNMEVLLRYGNKEQLREWLIPLLEGKIRSGFAMTEPRVASSDATNIECSIKRQGDSYIINGTKWWTSGAMDPRCRILIVMGKTDFNAAKHKQQSMILVDIQTPGVHIKRPLTVFGFDDAPHGHAEVTFENVCVPAKNIILGEGRGFEIAQGRLGPGRLHHCMRLIGVAERGMHMMVQRALNRRTFGKLIAQHGSFLSDMAKCRIELEKTRLLVLEAADQLDRHGNKKARGIIAMAKVAAPNMTLKVIDMAIQVHGAAGVSSDTVLAHMWATARTLRIADGPDEVHLGTIAKLELQRAKL* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2125 829 Gene3D - 559 673 IPR046373 GO:0016627
Apr1g2125 829 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 671 825 IPR036250 GO:0016627
Apr1g2125 829 CDD ACAD10_11_N-like 42 308 IPR041726 -
Apr1g2125 829 Gene3D - 409 557 IPR037069 GO:0016627|GO:0050660
Apr1g2125 829 PANTHER ACYL-COA DEHYDROGENASE IBR3-RELATED 1 829 - -
Apr1g2125 829 Gene3D - 674 828 - -
Apr1g2125 829 Coils Coil 819 829 - -
Apr1g2125 829 Pfam Acyl-CoA dehydrogenase, middle domain 560 661 IPR006091 GO:0016627
Apr1g2125 829 PANTHER MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED 1 829 - -
Apr1g2125 829 SUPERFAMILY Protein kinase-like (PK-like) 40 343 IPR011009 -
Apr1g2125 829 Pfam Phosphotransferase enzyme family 43 277 IPR002575 -
Apr1g2125 829 Pfam Acyl-CoA dehydrogenase, C-terminal domain 673 821 IPR009075 GO:0016627
Apr1g2125 829 Gene3D - 129 372 - -
Apr1g2125 829 Pfam Acyl-CoA dehydrogenase, N-terminal domain 416 556 IPR013786 GO:0016627|GO:0050660
Apr1g2125 829 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 407 686 IPR009100 GO:0016627
Apr1g2125 829 Gene3D Phosphorylase Kinase; domain 1 23 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2125 Apr-Chr1 30777122 30784947 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2125 1 827 Acyl Lipid Metabolism Gene Families AT3G06810 74.819 0.0 1307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2125 K00249 - gmx:100778771 1522.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2125 1 30777122 30784947 Apr1g2125 1 30777122 30784947 ECH