Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2124 ATGTCCTCTTCTAGATTCGATAGAGCTTCAAGCGTGAGAGAGAGGGTGCAAGATACCCTCTCTAGTTACCGCAATGAATTGATCTCTCTTCTCTCTAGGTATGTTGCTCGGGGCAAAGGAATACTACAACCACATGACTTACAAGATGAGGTAGAAAAGATTCTTAGAGAGGTTGAAGGGATGCAGAAACTCAAAGATAGCACTTTCGTCAAAGAGCTTGAATATGCTAAGGAAGCTATAGTTCTACCTCCTTTTGTATCTATAGCATTGCGTCCAAGACCTGGTGTTTGGGAGTATGTTCGTGTTAATGTATTTGAACTCAATGTGGATAATCTTAGTGTAGCAGAATACCTTCGATTCAAAGAAGAACTTGTAGATGGAGAGTGCACTTACAACTATGTGCTTGAACTAGACTTTGAGCCATTTAATGCAACATTCCCTCGACCAACTCGATCATCCTCCATTGGTAATGGGGTTCAATTTCTCAATCGTCATCTATCATCATTCATGTTTCGTAACAAAGAAAGTTTGGACCCTCTCCTTGCATTTCTCCGCACACACAAATATGATGGCCAAGCAATGATGTTAAATGATCGCATTCATAACATATCCAAGCTCCAGTCTTCTTTGGCAAAGGCAGAAGAATTCCTTTCTAAGCTCTTACCCAATACACCATATTCTGCCTTTGAATACGAACTACAGGGAATGGGATTTGAAAGAGGTTGGGGTGATACAGCACAAAGAGTGTCAGAAATGGTGCATCTTTTACTAGACATCCTTCAGGCTCCTGATCCAAACACCTTGGAGACATTTCTAGGAAGAATTCCTATGGTGTTCAACGTTGTAATTGTATCACCGCATGGTTATTTTGGCCAAGCAAATGTCTTAGGTTTGCCTGATACTGGTGGGCAGATTGTTTATATACTTGATCAAGTTCGTGCTTTGGAAAATGAAATGCTACTCAGAATTCAAAAGCAAGGGCTTGATGTGTCTCCAAAAATTTTGATTGTTACAAGATTGATACCAGAGGCAAAAGGGACAACATGCAATCAGAGACTAGAAAGAGTTAGTGGAACTGCACACACATATATATTGCGAGTACCTTTTAGAACTAAGGATGGAATTTTGAGAAAATGGATTTCAAGGTTTGACATATGGCCTTATCTGGAGACATTTGCAGAGGATGCCTCAAACGAAATCGCAGCTGAGTTACAAGGAATTCCAGATCTAATAATAGGCAACTACAGTGATGGAAATCTTGTTGCTAGCTTGTTATCCTATAAGCTAGGAATCACACAGTGTAACATAGCTCATGCATTGGAGAAGACAAAGTATCCAGATTCTGATATATATTGGAAAAAATATGAAGATAAGTACCATTTTACTTGTCAATTCACAGCCGACCTTATTGCAATGAACAATGCCGACTTTATAATCACAAGTACATACCAAGAAATTGCAGGAAGCAAGAATAATGTTGGACAATATGAGAGTCACACTGCCTTTACTCTTCCAGGATTGTATCGTGTTGTTCATGGCATTGATGTTTTTGATCCCAAGTTTAATATCGTGTCTCCAGGTGCAGACAAATGCATATATTTTCCATACTCTGACAGAGAAAACAGACTTACTTCTCTACATGGTTCAATTGAAAAGCTGGTATATGGTATTGAACAGAATGAAGAGCACATTGGCTTGTTGAATGATCAATCGAAGCCAATTATCTTTTCTATGGCAAGACTTGATGAAGTGAAAAATATGACAGGGCTTGTAGAATGCTTTGGTAAAAGCTCCAAATTGAGAGAGCTTGTGAATCTTGTGATAATTGGTGGTTACATTGATGTACAAAAATCTAGGGACAGAGAAGAAATGGGAGAGATAGAGAAAATGCATAACCTTATAGAAAAATACAACTTACACGGTCAGTTTCGTTGGATAAAAGCCCAAATGAACCGTGCTCGTAATGGAGAGCTCTATCGTTATATTGCTGACACCAAAGGCGTTTTTGTGCAGCCTGCATTTTATGAAGCTTTTGGCCTAACAGTTGTGGAAGCTATGACTTGTGGGCTTCCTACGTTTGCCACTTGTCACGGTGGCCCTGCTGAGATAATTGAGCATGGCATTTCTGGATTTCATATTGAGCCACATCACCCTGATCAAGTTGCTACAATGTTAATAAACTTTTTTGAGCAATGTCAACGTGATCCTAGCTACTGGAACAAGATTTCTGATGGAGGGCTTAAGCGCATCCATGAAAGGTATACATGGAAGATATACTCTGATAGGCTACTGACTCTAGCCAGTGTTTATGGCTTTTGGAAGCATGTCTCTAAGCTTGAGAGGAGAGAAACTAGGCGATACTTGGAGATGTTTTACATTCTCAAGTTTAGAAATTTGATAAAATCAATTCCATTGGCAGCCAATTAG 2427 0.3943 MSSSRFDRASSVRERVQDTLSSYRNELISLLSRYVARGKGILQPHDLQDEVEKILREVEGMQKLKDSTFVKELEYAKEAIVLPPFVSIALRPRPGVWEYVRVNVFELNVDNLSVAEYLRFKEELVDGECTYNYVLELDFEPFNATFPRPTRSSSIGNGVQFLNRHLSSFMFRNKESLDPLLAFLRTHKYDGQAMMLNDRIHNISKLQSSLAKAEEFLSKLLPNTPYSAFEYELQGMGFERGWGDTAQRVSEMVHLLLDILQAPDPNTLETFLGRIPMVFNVVIVSPHGYFGQANVLGLPDTGGQIVYILDQVRALENEMLLRIQKQGLDVSPKILIVTRLIPEAKGTTCNQRLERVSGTAHTYILRVPFRTKDGILRKWISRFDIWPYLETFAEDASNEIAAELQGIPDLIIGNYSDGNLVASLLSYKLGITQCNIAHALEKTKYPDSDIYWKKYEDKYHFTCQFTADLIAMNNADFIITSTYQEIAGSKNNVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADKCIYFPYSDRENRLTSLHGSIEKLVYGIEQNEEHIGLLNDQSKPIIFSMARLDEVKNMTGLVECFGKSSKLRELVNLVIIGGYIDVQKSRDREEMGEIEKMHNLIEKYNLHGQFRWIKAQMNRARNGELYRYIADTKGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGISGFHIEPHHPDQVATMLINFFEQCQRDPSYWNKISDGGLKRIHERYTWKIYSDRLLTLASVYGFWKHVSKLERRETRRYLEMFYILKFRNLIKSIPLAAN* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2124 808 CDD GT4_sucrose_synthase 280 765 - -
Apr1g2124 808 Gene3D Glycogen Phosphorylase B; 282 799 - -
Apr1g2124 808 PANTHER - 9 807 IPR012820 GO:0005985|GO:0016157
Apr1g2124 808 TIGRFAM sucr_synth: sucrose synthase 24 805 IPR012820 GO:0005985|GO:0016157
Apr1g2124 808 Gene3D Glycogen Phosphorylase B; 529 756 - -
Apr1g2124 808 Pfam Glycosyl transferases group 1 560 741 IPR001296 GO:0016757
Apr1g2124 808 Gene3D - 148 277 - -
Apr1g2124 808 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 297 766 - -
Apr1g2124 808 Pfam Sucrose synthase 8 555 IPR000368 GO:0005985|GO:0016157
Apr1g2124 808 PANTHER SUCROSE SYNTHASE 2 9 807 - -
Apr1g2124 808 Gene3D - 25 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2124 Apr-Chr1 30767494 30775025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2124 1 808 Glycosyltransferase AT4G02280 74.381 0.0 1309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2124 K00695 - gmx:100788717 1472.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2124 1 30767494 30775025 Apr1g2124 1 30767494 30775025 ECH