Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2106 ATGGGTGTTGTTACTCAGGAATATGCTACCCCTGCTGCTGTGCCCCCTGCAAGGCTTTTCAAAGCCATGACCTTAGATTTCCACAACCTCTTCCCCAAGCTTGTTGATGCCATCCACAGTATTGTTTTCACCCAAGGAACTGGTGGCCCTGGAACCATCAAGAAGATTACCACAATTGAAGGGGACAAAACGAAGTATGTGTTGCACAGAGTTGATGCAATTGATGAGGGTGCTTTTGTATATAACTTCAGCATAATTGAGGGTACTGGCTTGGCTGAACCATTGGAGAAGGTATCGTATAAGAGCCAATTGGTAGATGGTCCAAATGGAGGAACCATTAGGAAGGTGCATGTCCAATTTTTCACCAAAGGTGATGCTACCCTCAGTGAGGAAGAGCTCACGGCTAACAAAGCCAAGATCGAAGGGCTTGTAAAGCTCGTTGAAGGTTACCTTTTGGCCAACCCTGATTACTGA 474 0.4599 MGVVTQEYATPAAVPPARLFKAMTLDFHNLFPKLVDAIHSIVFTQGTGGPGTIKKITTIEGDKTKYVLHRVDAIDEGAFVYNFSIIEGTGLAEPLEKVSYKSQLVDGPNGGTIRKVHVQFFTKGDATLSEEELTANKAKIEGLVKLVEGYLLANPDY* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2106 157 Gene3D - 2 157 IPR023393 -
Apr1g2106 157 CDD Bet_v1-like 2 151 - -
Apr1g2106 157 PANTHER - 1 157 - -
Apr1g2106 157 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Apr1g2106 157 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Apr1g2106 157 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Apr1g2106 157 PRINTS Major pollen allergen Bet V1 signature 65 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Apr1g2106 157 PRINTS Major pollen allergen Bet V1 signature 84 97 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Apr1g2106 157 PRINTS Major pollen allergen Bet V1 signature 109 125 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Apr1g2106 157 PRINTS Major pollen allergen Bet V1 signature 143 153 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Apr1g2106 157 PANTHER PATHOGENESIS-RELATED PROTEIN 10 1 157 - -
Apr1g2106 157 SUPERFAMILY Bet v1-like 2 157 - -
Apr1g2106 157 Pfam Pathogenesis-related protein Bet v 1 family 3 154 IPR000916 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2106 Apr-Chr1 30587589 30588482 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2106 - - gmx:100527073 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2106 1 30587589 30588482 Apr1g2106 1 30587589 30588482 ECH