Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2083 ATGAACCTTAACACGAGCAGTAACTTGGAGACTCGTTCTCTTCTTAATGAGATTTGTAACTTTGATAAGAAGGGTCTCTTTGATCTTGGACACCCTCTTCTCAACCGCATCGCTGAGAGCTTCGTCAAAGCTGCTGGAATAGGAGCGGTTCAAGCTGTGTCTCGTGAGGCTTATTTTACAGCCATTGAAGGTACCGGTGTGGATAACAGTGGCGGTTTGCCAACAGAAATATCAGGCGCCAAAAAAAATTGTTTGCCTGGTCTAAGAGGAGAGACAAGTAGCAAATCTGTTGAGGCCTTGGTGAAGAAAACCGGCAAGGAGTCCTTACAATGGGGAGTGGCTGCAGGAATATATTCAGGTCTCACATATGGGCTGAAGGAAGCTCGTGGAGCTCATGACTGGAAAAACAGTGCAGTTGCGGGAGCAATCACTGGAGCAACGCTTGCACTTACATTGGAAAACTCCACTCACGAACAGATTGTGCAATGCGCTATCACTGGAGCTGCTATCTCCACTGCAGCAAATCTTCTCACTGGGATTTTCTAA 546 0.467 MNLNTSSNLETRSLLNEICNFDKKGLFDLGHPLLNRIAESFVKAAGIGAVQAVSREAYFTAIEGTGVDNSGGLPTEISGAKKNCLPGLRGETSSKSVEALVKKTGKESLQWGVAAGIYSGLTYGLKEARGAHDWKNSAVAGAITGATLALTLENSTHEQIVQCAITGAAISTAANLLTGIF* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2083 181 PANTHER OUTER ENVELOPE PORE PROTEIN 16-2, CHLOROPLASTIC 7 181 - -
Apr1g2083 181 Pfam Tim17/Tim22/Tim23/Pmp24 family 34 171 - -
Apr1g2083 181 PANTHER TIM23 7 181 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2083 Apr-Chr1 30365456 30367218 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2083 - - gmx:100305849 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2083 1 30365456 30367218 Apr1g2083 1 30365456 30367218 ECH