Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2076 ATGCTGCTGTCTTCGCTCTTCACGAGAGCCCAGAGGTTCTCTTTGCCTGCTCTTCTGCTTCTATTGGAACTATTCACTATAAACCTTCGCACCGCAGATGCTCAAATTGGTGTTTGTTATGGTATGATGGGCAACAATCTACCACCAGCAAACGAAGTTATAGATCTTTATAGATCAAACAACATCAGGAGAATGAGACTCTATGATCCAAATCAAGGTGCTCTACAAGCACTTAGAAATTCTGGCATCGAACTAGTGCTTGGAGTGCCCAACTCCGACCTTCAAGGCCTTGCCACCAACGCTGACAATGCACGCCAATGGGTACAAAGGAATGTGTTGAATTTTTGGCCTAGTGTCAAAATCAAGTATATAGCTGTTGGCAACGAAGTGAATCCCGTTGGAGGCTCTTCTTGGCTTGCCCAATATGTTCTACCCGCTGTCCAAAACATATACCAAGCTATAAGAGCTCAAGGCCTTCATGACCAAATCAAGGTCTCAACCGCTATTGACATGACCCTAATAGGAAACTCCTACCCCCCATCACAAGGTTCCTTTAGGAATGATGTGAGGTCATACATTGACCCCATAATTGGATACTTGTTATATGCTAATGCACCTTTATTAGTAAATGTCTACCCTTATTTTAGTTACACGGGTAACCCTCGTGATATATCACTTCCCTATGCTCTTTTCACCTCTCCAAATGTTGTGGTGTGGGATGGTCAATATGGGTACCAAAATTTGTTTGATGCTATGTTGGATGCGGTGCATGCAGCTATTGATAACACTGGAATTGGGTATGTTGAAGTTGTTGTGTCCGAGAGTGGGTGGCCCTCGGAGGGAGATTTTGCCGCTACTTATGATAATGCACGTGTGTACTTAGATAACTTGATTCGTCGTGCTGGAAGGGGTACCCCAAGAAGGCCTTCTAAGCCAACGGAGACTTATTTGTTTGCTATGTTTGATGAGAATCAGAAGAACCCAGAGATAGAGAAACATTTTGGACTCTTCTCTCCCAATAAACAAAAGAAGTACCCATTTGGGTTTGGTGGGAAAAGGAACATTGAAGTTGTTGATGATTACATCAATGCAACAGTTTCCCTTAAGAGTGACATGTGA 1119 0.4325 MLLSSLFTRAQRFSLPALLLLLELFTINLRTADAQIGVCYGMMGNNLPPANEVIDLYRSNNIRRMRLYDPNQGALQALRNSGIELVLGVPNSDLQGLATNADNARQWVQRNVLNFWPSVKIKYIAVGNEVNPVGGSSWLAQYVLPAVQNIYQAIRAQGLHDQIKVSTAIDMTLIGNSYPPSQGSFRNDVRSYIDPIIGYLLYANAPLLVNVYPYFSYTGNPRDISLPYALFTSPNVVVWDGQYGYQNLFDAMLDAVHAAIDNTGIGYVEVVVSESGWPSEGDFAATYDNARVYLDNLIRRAGRGTPRRPSKPTETYLFAMFDENQKNPEIEKHFGLFSPNKQKKYPFGFGGKRNIEVVDDYINATVSLKSDM* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2076 372 Gene3D Glycosidases 35 350 - -
Apr1g2076 372 SUPERFAMILY (Trans)glycosidases 36 348 IPR017853 -
Apr1g2076 372 ProSitePatterns Glycosyl hydrolases family 17 signature. 268 281 IPR000490 GO:0004553|GO:0005975
Apr1g2076 372 Pfam Glycosyl hydrolases family 17 36 347 IPR000490 GO:0004553|GO:0005975
Apr1g2076 372 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 24 356 IPR044965 GO:0004553|GO:0005975
Apr1g2076 372 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 24 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2076 Apr-Chr1 30290634 30292984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2076 42 359 Glycoside Hydrolase AT4G16260 63.438 2.33e-146 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2076 - - ccaj:109791097 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2076 1 30290634 30292984 Apr1g2076 1 30290634 30292984 ECH