Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2070 ATGGTTACCATTCCTCAATGTCATCCTATTTTGAAGGACAATTCAGCTACCTTCAGTTTCCCTCACAGATTAAATCTCCCTCCACAATCCCACATCACCAACCTCCAAAAAACACAAACAATGAAACCCAACAACAAAATCCAAATCCCCTTCATCACCCACTCGCTCTTCTCCATAATCCTTGTTTGTTTTGCACTAGGAAAATGCACGGCCCACGATACCAAAAACGCATTGTTACCAAACGAAGCCTTTCCCCCACAATTCTCAGACTCAGAGCTTCCATTCCCCTTCCCTCCTTCAGAAACACCCAATAGCAACCCAACATCAGAGGAAGGCTTCGCTCATTCACCTTCCTCCTTCTCTTCTGCTTTCTCAGACATCCTCAAAGGAACAGTACTACGTGGCAACTCCCTCGTAATGCCCGAACAAGTCAACTCCGAAGAATCCCAAACCAAAACCAAAATGATCAAATACCAAGCGGTGAAACAGATATGTTCCCACACGGACTACCCTGACGTGTGTCTTTCCACCATCACACCCTTTTTGAACGACCATTTCGACGTCATGAACGTTCTAGAAGCTTCCATAAAGGCTTGCGGTCACCAGATAAGGTTCACCATAAGCAAGGTGAAGAAGTACTTTGGTAGCTCACCCGAGCTGGATTCTTTGCTCACTGATTGCAGGAATCAGTACTCTGACGCCATGGAAAACCTTCAGAGAGCCATGGATGCCATTCCGTCACGTGATCTTGGCACCGTTACCGTCATGCTTAGCGCTGTTATGGCAGATGTTTCCACGTGCGAGAGTGGGTTTGAGGATCTCAAATCCACCTCACCAGTTGCTAATTCCGAAGGTTTAGTCACCATTACCGCTAGTAATTGCCTTGCTATTGCTTCTTTGATTCCTTATTAG 912 0.4605 MVTIPQCHPILKDNSATFSFPHRLNLPPQSHITNLQKTQTMKPNNKIQIPFITHSLFSIILVCFALGKCTAHDTKNALLPNEAFPPQFSDSELPFPFPPSETPNSNPTSEEGFAHSPSSFSSAFSDILKGTVLRGNSLVMPEQVNSEESQTKTKMIKYQAVKQICSHTDYPDVCLSTITPFLNDHFDVMNVLEASIKACGHQIRFTISKVKKYFGSSPELDSLLTDCRNQYSDAMENLQRAMDAIPSRDLGTVTVMLSAVMADVSTCESGFEDLKSTSPVANSEGLVTITASNCLAIASLIPY* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2070 303 MobiDBLite consensus disorder prediction 90 117 - -
Apr1g2070 303 Pfam Plant invertase/pectin methylesterase inhibitor 160 297 IPR006501 GO:0004857
Apr1g2070 303 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 160 301 IPR035513 -
Apr1g2070 303 SMART PMEI_2 156 297 IPR006501 GO:0004857
Apr1g2070 303 Coils Coil 224 244 - -
Apr1g2070 303 CDD PMEI-like_2 160 301 - -
Apr1g2070 303 TIGRFAM PME_inhib: pectinesterase inhibitor domain 151 298 IPR006501 GO:0004857
Apr1g2070 303 Gene3D Invertase/pectin methylesterase inhibitor family protein 157 302 IPR035513 -
Apr1g2070 303 PANTHER PECTINESTERASE INHIBITOR-LIKE 151 301 - -
Apr1g2070 303 PANTHER PECTINESTERASE INHIBITOR-LIKE 151 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2070 Apr-Chr1 30180687 30181598 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2070 - - aprc:113852243 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2070 1 30180687 30181598 Apr1g2070 1 30180687 30181598 ECH