Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2062 ATGGCTCTCAGATTTTTCTGCACTGCATACATTTCAACTCAACATCTTGCTTCTGCTAAAACTCCTGTTTCCTCTTCTCTCTCTCTGACAAATTCATGCATGTGTGTTGAGAACCTGAAGAGCCTCTTGAACAGTGTGGTTTCATCTTCTCCACTTGAGTCTCTCCAAAGAGGCAACTGGGTCAAGCTCATTTGTGGTGCAAGCTTTGAGGATGTTGTTGATATCAGAAATCTCAGTTTGGTTTACACTCTTGCTGGAGTTGACTGCATTGACTGTGCTGCTGATGCATCGGTTGTCAATGCTGTGAATGAAGGGATTGAAGCTGCAAGAGATATTACATGCCTTAGAAGACCGTGGGTGATGATTAGTGTCAATGATGATAAAGATCTTCACTTTCGTAAGGCTGAATTTGATCCAGAGGACTGTCCAGCAGACTGTTCACGGCCTTGTGAAAATGTGTGCCCTGCTAACGCAATATCATTCCAAGGGAAATCTACTTTAGGAGTTTCATATAATACTGAAGTACCTAGAGTACTAAAGGATGGAGTCATAACAGAACGCTGCTATGGCTGTGGTCGCTGTCTTCCAGTTTGCCCCTATGATAAAATAAGAGCGGTAACATATGTTAGGGATGCTGTTACAACTGCTGATCTCATCAAGAGAAATGATGTTGATGCTGTGGAGATACATACAAGTGGGAGACAGAGTACTATGTTCAAAGAACTCTGGCATGCTCTAGGAGATTCAGTGAAAAATTTGAAGCTGATAGCAGTTAGCTTACCAAATGGTAGCGATTCAACAATATCCACTATGAACAAATTGTTCTCTATCATTAAACCTAATCTTCAAAGCTTCAACTTATGGCAGTTAGATGGCCGTCCTATGAGTGGAGATATTGGGAGAGGAGCAACAAAGGAATCAATTGCCTTTGCTGTTCAATTGGCTAAAGCAGAAAAAAGACCTCCTGGTTTTCTTCAACTTGCTGGTGGAACTAATGCTCACACAATTGATGGGTTGAAGCAAGAGGGTCTCTTTCAAACAACTATTACAGAGTATTTACTTGATGTTACGTCAACAATCAACCCATCTTATTCATCGCATGCTCTAATTAGCGGCATAGCTTATGGTGGCTACGCACGGAAGATTGTTGGTAGAGTATTGAGATCCATGCAAACCCAATATGGGGAAGCTGCTTCAATTGAGGATCATCCCGAGCATCTCTTGATGGCTCTAAAGGAAGCACTTGCTTTGGTTGGACCTGTAAAATGTCTATGA 1275 0.4188 MALRFFCTAYISTQHLASAKTPVSSSLSLTNSCMCVENLKSLLNSVVSSSPLESLQRGNWVKLICGASFEDVVDIRNLSLVYTLAGVDCIDCAADASVVNAVNEGIEAARDITCLRRPWVMISVNDDKDLHFRKAEFDPEDCPADCSRPCENVCPANAISFQGKSTLGVSYNTEVPRVLKDGVITERCYGCGRCLPVCPYDKIRAVTYVRDAVTTADLIKRNDVDAVEIHTSGRQSTMFKELWHALGDSVKNLKLIAVSLPNGSDSTISTMNKLFSIIKPNLQSFNLWQLDGRPMSGDIGRGATKESIAFAVQLAKAEKRPPGFLQLAGGTNAHTIDGLKQEGLFQTTITEYLLDVTSTINPSYSSHALISGIAYGGYARKIVGRVLRSMQTQYGEAASIEDHPEHLLMALKEALALVGPVKCL* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2062 424 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 133 164 IPR017896 -
Apr1g2062 424 PANTHER ATP-BINDING CASSETTE SUB-FAMILY E MEMBER 1 21 419 - -
Apr1g2062 424 SUPERFAMILY 4Fe-4S ferredoxins 123 211 - -
Apr1g2062 424 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 IPR017900 -
Apr1g2062 424 Pfam Iron-Sulfur binding protein C terminal 218 419 IPR021039 -
Apr1g2062 424 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 21 419 IPR013283 -
Apr1g2062 424 Gene3D - 127 250 - -
Apr1g2062 424 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 179 208 IPR017896 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2062 - - gmx:100804088 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2062 1 30118717 30122615 Apr1g2062 1 30118717 30122615 ECH