Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2058 ATGGAGGGTGGAGAAGAAGGAGTAGAGATGTTGGTTGACTCTCACTCGAAGGACTTGCAGCAACAGAGCAAAGCCTTCGACAAACTCACCGATCGCGTCGAAGATCGCCAACTCGATTCCACTCGCGTCCAAGAAGCCATGGCTTCCATCGCTGCTTCTGCCGAAGCTGATCGCAACGCCATGCGCATCAGAGAGAAAGAATTAGCTGCTGTTAAGATAAATGCAGCAGATGTTGATATAATCGCAAATGAATTAGAGTTGGACAAAAAGGTTGCTGAACAAACCTTGCGTGAGCATAAAGGTGATGCAGTTGCTGCCATTCGACATTTGCTTCACTAA 339 0.4749 MEGGEEGVEMLVDSHSKDLQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADRNAMRIREKELAAVKINAADVDIIANELELDKKVAEQTLREHKGDAVAAIRHLLH* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2058 112 CDD UBA_HYPK 71 111 IPR038922 -
Apr1g2058 112 Coils Coil 82 102 - -
Apr1g2058 112 PANTHER HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER 1 111 - -
Apr1g2058 112 PANTHER BNAA05G30770D PROTEIN 1 111 - -
Apr1g2058 112 MobiDBLite consensus disorder prediction 1 28 - -
Apr1g2058 112 Pfam HYPK UBA domain 71 111 IPR044034 -
Apr1g2058 112 Gene3D - 72 110 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2058 - - gmx:100527445 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2058 1 30079943 30083066 Apr1g2058 1 30079943 30083066 ECH