Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2055 ATGGGTATCAAGTTGAATAGACCAGTCATTATTGAGATTTTGTTTCTTGTTTTTATACGTTTGGCCTTGTCTAGTATTTCCACCACTTCAGATGAACCACCCGCAAATTTTGTCTTTGGAGATTCTCTTGTCGATGTGGGGAACAACAATTACCTTGTTTCCCTCTCAAAGGCCAATTTTCCACCCTTTGGTATTGATTTTGGAAGACCAACAGGAAGGTTCACTAATGGAAGAACCATTGTTGACATTATTGGTGAGGAACTAGCTAATGGTTTTTCTTTTACTCCTCCTTACTTGGCACCTACTTCACTTGGTCCAGTGGTTTTGAAGGGTGTGAACTATGCTTCTGGTGGAGGTGGAATCCTCAACTTCACTGGAAAAATCTTTGGTGGTCGAATCAACTTTGATGCACAGTTAGATAACTTTGCTAATACCAGGCAAGATATAATCTCCAACATTGGTGTTCCTGCGGCTCTCAATCTATTCAAAAGGTCAATCTTTTCAGTGACAATAGGTTCGAACGATTTCATTAATAACTATTTAGCACCACCAGTCTCAATTTACGAGCAGAAATTTGGATCTCCGGAACTCTTTGTGGACACCTTAATTTCAAGGTTCAGAGAACAGCTCACTAGGCTTTTCAATCTCGGAGCAAGGAAAATTATTGTGACAAATGTGGGGCCTATTGGGTGTATACCAAGTCAGAGGGATACGAACCTAGCTGTTGGTGATAGCTGTGTCGCTTTCCCAAATCAGCTAGCACAGTTATATAACATTAAGTTGAAGGGCCTTATAGCAGAGCTAAGCTCAAATCTGAAGGGTTCAATGTTTGTTTATGCAGATGTTTACCACATTTTAGATGATATACTCAACAATTACACAGCTTATGGTTTTGAGAACCCATATTCCTCTTGTTGTTGCTTGGCTGGGCGCTTTGGAGGTTTGATTCCTTGTGGTCCAACATCAAAAGTTTGTTGGGATAGATCAAAATATGTGTTTTGGGATCCTTGGCATCCTACTGAGGCATCAAATGTTATCATTGCTAAGCGACTGTTAGATGGTGATCATAATGACATTTTTCCAATGAATGTTCGCCAACTCTTTAATTATTTGACCTGA 1119 0.3986 MGIKLNRPVIIEILFLVFIRLALSSISTTSDEPPANFVFGDSLVDVGNNNYLVSLSKANFPPFGIDFGRPTGRFTNGRTIVDIIGEELANGFSFTPPYLAPTSLGPVVLKGVNYASGGGGILNFTGKIFGGRINFDAQLDNFANTRQDIISNIGVPAALNLFKRSIFSVTIGSNDFINNYLAPPVSIYEQKFGSPELFVDTLISRFREQLTRLFNLGARKIIVTNVGPIGCIPSQRDTNLAVGDSCVAFPNQLAQLYNIKLKGLIAELSSNLKGSMFVYADVYHILDDILNNYTAYGFENPYSSCCCLAGRFGGLIPCGPTSKVCWDRSKYVFWDPWHPTEASNVIIAKRLLDGDHNDIFPMNVRQLFNYLT* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2055 372 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 26 368 - -
Apr1g2055 372 Gene3D SGNH hydrolase 27 354 IPR036514 -
Apr1g2055 372 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN 26 368 - -
Apr1g2055 372 Pfam GDSL-like Lipase/Acylhydrolase 37 350 IPR001087 GO:0016788
Apr1g2055 372 CDD SGNH_plant_lipase_like 34 355 IPR035669 -
Apr1g2055 372 SUPERFAMILY SGNH hydrolase 38 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2055 Apr-Chr1 30066827 30068457 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2055 34 369 Acyl Lipid Metabolism Gene Families AT4G10950 36.578 2.62e-70 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2055 - - gmx:100813870 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2055 1 30066827 30068457 Apr1g2055 1 30066827 30068457 ECH