Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2039 ATGCTAAACATGAAGCACATATCTCTAATCTTTAGCATTATCGTTGTAGCTACAATTTCAATGCCAATAACTCATTGTAGAGTGTTGAAACCAGATGATGTGAAACTCATAGAAGACACATGCAAGCAAACCCCTAATCCAAATCTTTGTGTTCAACTCCTTAAAGCAGACCCACGTAGCTCTGGTGCAGATATTGAAGGCCTAGCACTAATCCTGGTCGATGTGATCAAAGGCAAAGCAAATGAAGCATTGAACAAAATCAATCAACTTCTTAAGGGGAAAGTGGAAAAGAATGCATTGATTTCATGTGCTGGTAAGTACAAAGCAATTTTGGAAGCTGATGTGCCACAAGCCACTGAAGCTTTGAAAACTGGGAACCCCAAGTTTGCAGAAGATGCGGCAAGTGATTCTGCTGTTGAGGCCACTTCTTGTGAGAAGGGATTTTCTGGGAAATCACCACTTACCAATGAGAACAATGGTATGAATGATGTTGCAAACGTTACAAGGGCCGTTGTTAGACTTTTGCTCTAG 531 0.4087 MLNMKHISLIFSIIVVATISMPITHCRVLKPDDVKLIEDTCKQTPNPNLCVQLLKADPRSSGADIEGLALILVDVIKGKANEALNKINQLLKGKVEKNALISCAGKYKAILEADVPQATEALKTGNPKFAEDAASDSAVEATSCEKGFSGKSPLTNENNGMNDVANVTRAVVRLLL* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2039 176 PANTHER PECTINESTERASE INHIBITOR-LIKE 17 176 - -
Apr1g2039 176 CDD CIF_like 36 175 IPR034087 GO:0004857|GO:0043086
Apr1g2039 176 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 175 IPR006501 GO:0004857
Apr1g2039 176 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 17 176 - -
Apr1g2039 176 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 175 IPR035513 -
Apr1g2039 176 SMART PMEI_2 32 171 IPR006501 GO:0004857
Apr1g2039 176 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 176 IPR035513 -
Apr1g2039 176 Pfam Plant invertase/pectin methylesterase inhibitor 36 169 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2039 Apr-Chr1 29942060 29942590 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2039 - - gmx:100776731 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2039 1 29942060 29942590 Apr1g2039 1 29942060 29942590 ECH