Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2035 ATGGAGGCACTGCTCCATGGTTCATCTCCTTCACCTTCTTATCTTCTCCCTAAGCTTCCAAAAACTACGATGATATTCGGTAACTGCGTTAGGTTCAATTTCAATTACAACCCCTGCTTCTTATTCGCAAATGGGTGCCCTTCTTCTTCTTTATTGCGACTCCATGTTCAAAATAAGTCCAGAAAAGTAGCATCAGTGATTGTTAATGCCCGCAAGAAAGATAAGAAAGAAGATAGCCATAGCTCTGCACCAAAACCTGACGAGGCCACAGGTTTCTTTCCTGAATCTGTGCTCCTTAAAAAGAGAACGGTTGAGGAAGATGGCAAGCTTCTCCCAGAGTTTTTAGATGCTGAAGAGAGACAACTTTTTGAATCGCTGATGCTTGAACTGGAAAGTGATATGAATGTTGAAATACTGCGCCACTATGAAGTTGTTTACTTAATTCATGAGAAGCATGAAGATGAGGTTGCTGCTGTCAATGAAAAAGTTCAAGAATTTTTTAGAGAGAAGAAAGGGACGGTGTGGAGACTAAATGATTGGGGTATGAGAAGGCTAGCTTACAAAATAAAGAAAGCTAATAATGCCCGCTACATTTTGATGAACTTCGAGTTGGATGCCAAATATATCAACGATTTCAAGACTCTGCTGGACCAAGATGAAAGAGTTATTCGGCATCTCGTGATAAAGAGGGATGAGGCAATCACTAAAGATTGCCCTCCTCCTCCTGAGTTTCATACACTGCGTGCAAATGCAGGTGATGATGATGAGGATGATGAAGAATTTGATGAAGATTACGATAATGATGAGGATGGTAAAGATGAGATGGATGGCTATGATGATGATGATGATGGTGGCAGAGATGATATTATTGTTATTGACGGGGATGATGATGATACAGATTCTAGAAATGAGACATCAGCAAATGTTAGACAGCCAGATACTAGAAAATTGTGGGCTGAGAATGTAGGAAGGTAG 975 0.4051 MEALLHGSSPSPSYLLPKLPKTTMIFGNCVRFNFNYNPCFLFANGCPSSSLLRLHVQNKSRKVASVIVNARKKDKKEDSHSSAPKPDEATGFFPESVLLKKRTVEEDGKLLPEFLDAEERQLFESLMLELESDMNVEILRHYEVVYLIHEKHEDEVAAVNEKVQEFFREKKGTVWRLNDWGMRRLAYKIKKANNARYILMNFELDAKYINDFKTLLDQDERVIRHLVIKRDEAITKDCPPPPEFHTLRANAGDDDEDDEEFDEDYDNDEDGKDEMDGYDDDDDGGRDDIIVIDGDDDDTDSRNETSANVRQPDTRKLWAENVGR* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2035 324 PANTHER 28S RIBOSOMAL PROTEIN S6, MITOCHONDRIAL 102 253 - -
Apr1g2035 324 CDD bS6 141 230 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Apr1g2035 324 ProSitePatterns Ribosomal protein S6 signature. 181 190 IPR020815 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Apr1g2035 324 TIGRFAM S6: ribosomal protein bS6 140 231 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Apr1g2035 324 MobiDBLite consensus disorder prediction 234 324 - -
Apr1g2035 324 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 102 253 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Apr1g2035 324 MobiDBLite consensus disorder prediction 253 300 - -
Apr1g2035 324 MobiDBLite consensus disorder prediction 71 90 - -
Apr1g2035 324 Pfam Ribosomal protein S6 141 229 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Apr1g2035 324 SUPERFAMILY Ribosomal protein S6 139 239 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Apr1g2035 324 Gene3D - 134 237 IPR014717 -
Apr1g2035 324 Coils Coil 149 169 - -
Apr1g2035 324 Hamap 30S ribosomal protein S6 [rpsF]. 139 232 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2035 - - aprc:113848700 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2035 1 29912262 29915670 Apr1g2035 1 29912262 29915670 ECH